Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere05g2264 ATGAATTGTAATCTGACCCATTTAGTATTTGCTATTGATACAGATCGTGTGTGTCTTGCAAGAATGGCGACGTTCGAACTTTACCGTAGGTCGACTATCGGAATGTGCCTCACCGAGACTCTGGATGAGATGGTTCAGAATGGTACTCTCAGCCCGGAGCTTGCTATTCAGGTTCTTGTCCAGTTCGATAAGTCTATGACTGAAGCTCTGGAAACGCAAGTCAAGAGTAAGGTCTCAATTAAGGGACATCTACATACGTACAGATTTTGCGACAATGTTTGGACCTTCATTTTACATGATGCTTTGTTCAAGAGTGAAGAATGCCAAGAGAATGTTGGACGGGTTAAAATAGTGGCTTGTGACTCTAAGTTGCTCTCACAGTAA 384 0.4271 MNCNLTHLVFAIDTDRVCLARMATFELYRRSTIGMCLTETLDEMVQNGTLSPELAIQVLVQFDKSMTEALETQVKSKVSIKGHLHTYRFCDNVWTFILHDALFKSEECQENVGRVKIVACDSKLLSQ 127
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere05g2264 127 CDD TFIIA_gamma_N 25 72 IPR015872 GO:0005672|GO:0006367
Dere05g2264 127 SUPERFAMILY Transcription factor IIA (TFIIA), alpha-helical domain 25 75 - -
Dere05g2264 127 FunFam Transcription initiation factor IIA subunit 2 23 75 - -
Dere05g2264 127 SUPERFAMILY Transcription factor IIA (TFIIA), beta-barrel domain 73 123 IPR009088 GO:0005672|GO:0006367
Dere05g2264 127 Pfam Transcription initiation factor IIA, gamma subunit 81 122 IPR015871 GO:0005672|GO:0006367
Dere05g2264 127 PIRSF TFIIA_gamma_hum 21 127 IPR003194 GO:0005672|GO:0006367
Dere05g2264 127 PANTHER TRANSCRIPTION INITIATION FACTOR IIA SUBUNIT 2 22 127 IPR003194 GO:0005672|GO:0006367
Dere05g2264 127 FunFam Transcription initiation factor IIA subunit 2 76 127 - -
Dere05g2264 127 CDD TFIIA_gamma_C 78 123 IPR015871 GO:0005672|GO:0006367
Dere05g2264 127 Gene3D - 24 75 IPR009083 GO:0005672|GO:0006367
Dere05g2264 127 Pfam Transcription initiation factor IIA, gamma subunit, helical domain 25 70 IPR015872 GO:0005672|GO:0006367
Dere05g2264 127 Gene3D - 76 126 IPR009088 GO:0005672|GO:0006367
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere05g2264 Dere-ChrDere05 32850661 32853992 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere05g2264 05 32850661 32853992 Dere05g2264 05 32850661 32853992 ECH