Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere05g2254 ATGTCCATATTTACTAATGGCTCTATTTTATTGTATTTCCCTTTTGTCCCCACTACCATTTCAAAGCTCCGCTTCTCACCACTTCCGCTTCCTCCACAACGTTCTCCTTCTGTTCTTTGGTTCTCTTCTCGCTCAGGCTTGCTGCTGCTTGCTACCATACATCTTTGCTTTTGGTGCACACTTGTTAATCATACTTTTGTGCTGATTAGTGCGTCTATGCAGTTTCTTGCGTATAGAGCTATCCTTGTAATGTTCAAGGTACATAGATGTGGGCGTGCAGTTTTGCATTTACACAGTGCTGATCTAGTCGCGCTTTATTGTTGTATTTCATTTTATGTCACAGCAGATATGGATAACAACGAAGGTCAAAGCATCTATCCGTTGCAACGTTGTAAAACTCTTCACCTGGTTAGACATGCCCAAGGGATTCACAATGTAGAAGGAGAGAAAAACCATGATGCATACTTGTCTTATGATCTTTTTGATGCACAACTAACCCCTCTTGGCTGGAAGCAGGTTGATAATCTGCGTGCACATGTTCAAGCATGTGGTCTTTCCAAGAAAATCGAATTAGTGATTGCTTCCCCGTTGTTAAGGACCATGCAAACAGCAGTTGGAGTCTTCGGTGGTGAAGCATACGCTGACGGGATTAATGCACCTCCTCTGATGAAGGAAAACGTGGGACATAGTGAACGTGCTGCAATTTCTAGTCTGAATTCCCCTCCATTTATAGCAGTAGAGCTTTGCCGGGAGCATTTGGGAGTTCATCCTTGTGATAAGAGAAGAAATATTAATGAGTACCGAGATTTGTTTCCCGCAATTGATTTTTCATTGATAGAAAGTGACGAGGACATTTTGTGGACACCTGACATTAGAGAGAAGAATGAAGAAGTTGCTGCTAGGGGCCTGAAGTTTTTGAAATGGCTGTGGACGCGTAAAGAAAAGGAGATAGCAGTTGTTACTCACAGTGGTTTTCTGTTTCATACCCTAAGCGCTTTTGGAAATGACTGCCATCCAACTGTGAAGAGTGAACTATGCAAACACTTTGCTAATTGTGAGCTGCGTTCAGTGGTTATCATTGATAGAGGTTTGATTGGATCAGATGAGTCAACTACTAATTATCCTGGGAAAATTCCTCATGGCCTTGATCTTCCAAGTGATGTTGCCGACGAAAAACATCAAGGGAATGGACCGACCCAGTAA 1203 0.4248 MSIFTNGSILLYFPFVPTTISKLRFSPLPLPPQRSPSVLWFSSRSGLLLLATIHLCFWCTLVNHTFVLISASMQFLAYRAILVMFKVHRCGRAVLHLHSADLVALYCCISFYVTADMDNNEGQSIYPLQRCKTLHLVRHAQGIHNVEGEKNHDAYLSYDLFDAQLTPLGWKQVDNLRAHVQACGLSKKIELVIASPLLRTMQTAVGVFGGEAYADGINAPPLMKENVGHSERAAISSLNSPPFIAVELCREHLGVHPCDKRRNINEYRDLFPAIDFSLIESDEDILWTPDIREKNEEVAARGLKFLKWLWTRKEKEIAVVTHSGFLFHTLSAFGNDCHPTVKSELCKHFANCELRSVVIIDRGLIGSDESTTNYPGKIPHGLDLPSDVADEKHQGNGPTQ 400
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere05g2254 400 FunFam Phosphoglycerate mutase-like protein 1 128 375 - -
Dere05g2254 400 SMART PGAM_5 133 329 IPR013078 -
Dere05g2254 400 SUPERFAMILY Phosphoglycerate mutase-like 132 362 IPR029033 -
Dere05g2254 400 Gene3D - 132 368 IPR029033 -
Dere05g2254 400 PANTHER BROAD-SPECIFICITY PHOSPHATASE YOR283W-RELATED 129 362 - -
Dere05g2254 400 Pfam Histidine phosphatase superfamily (branch 1) 134 206 IPR013078 -
Dere05g2254 400 CDD HP_PGM_like 133 225 IPR013078 -
Dere05g2254 400 MobiDBLite consensus disorder prediction 371 400 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere05g2254 Dere-ChrDere05 32703091 32708766 Dispersed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere05g2254 05 32703091 32708766 Dere05g2254 05 32703091 32708766 ECH