Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere05g2237 ATGTGCAATACCAAGCCATCTTCAACATCCTCATTTTTGTGTCCAACACAGACCCAGCTTCTCATAACTTCCCACAAAGTCATGGATGCCCCTGACGATCATCAAGATGAACTTCAAAGATGGCCAACTCTTAATGAGGTGGCATCAGAAATCAAAGCGTTAGGAAAGATATCAGGCCCAACAGCCATCACTGGTTTACTACTATACTCAAGAGCTATGATCTCGATGCTCTTCCTTGGGTATCTCGGCGAGACGGAGCTTGCGGGAGGCTCTCTCTCTATTGGTTTCGCCAACATCACTGGCTACTCTGTCATCTCTGGTTTAGCCATGGGAATGGAACCTATTTGTGGACAAGGTCACGGCGCAAAACAAGGCAAGCTCCTCGGCCTCACCCTCCAAAGAACCGTCCTCCTCCTTCTCTCCACTTCCATCCCCATCTCCTTCATGTGGCTTAACATGAAGACAATCCTCTTATGGTGTGGTCAAGACGAAGCCATATCCTCAATGGCACAAACTTTCATTCTTTTCTCCATTCCTGACCTCTTCCTCCTTTCTCTTCTCCACCCTCTCCGAGTCTTCCTCAGAACTCAAAGCATCACATTGCCATTAACATATTGCTCAGCCATCTCTGTTCTCCTCCATGTCCCATTAAATTTCCTGCTGGTCGTTCAATTCAAGATGGGTATTGCAGGGGTGGCCATAGCAATGGTTTGGACCAACCTTAATCTCTTCCTCTTCCTCTGTTCCTTTGTCTACTTCTCTGATGTATGTAAGGACTCGTGGGTCCCTCCGAGCATGGAGTGTCTCAGGGGATGGTCTTCTCTACTTGCTCTTGCGGTTCCAACCTGCGTCTCAGTGTGCCTCGAGTGGTGGTGGTACGAGCTCATGATAATGCTGTGTGGGCTTCTGGGTAATCCCAAAGCCACCATTGCATCAATGGGAATTCTAATTCAAACAACCTCTTTAGTCTATGTCTTCCCTTCATCCTTAAGCCTTGGTGTTTCTACAAGAGTGGGTAACGAGCTAGGCGCGAACCGCCCAGGAAAAGCCCGCATTTCCATGATAGTCTCGCTCTTCTGTGCCGTGGGCTTGGGCCTTGGGGCTATGGGCTTTACGACCTTATTGAGGCACCAATGGGGGAGATTATTCACCAGCGACGAAGAAATCCTCAAGCTCACGGCCATTGCATTGCCTATCGCTGGCCTGTGTGAGCTCGGAAACTGTCCACAGACCACCGGTTGTGGAGTTCTGAGAGGCAGCGCGAGACCCACCATTGGAGCTAACATCAATCTTAGTTCTTTTTACTTGGTGGGTATGCCAGTGGCCATCCTCCTCGGTTTCATCGCCAAAATGGGATTTGCTGGGCTCTGGCTCGGGTTGCTTGCGGCCCAAGCCTCTTGTGCGGGCCTCATGCTGCTGGTTCTGTGCAGAACAGATTGGAATGTGCTAGCAGAAAGAGCAAAAGAGCTAACTTCATCTAATACTGCTATTACTGCTGCTGCTGTTAATTCTGGGTTGTTACCCACATTCACAAAAACAGAGTCTAACAAAACAGCTTGTCTTAAGGAGATAGTGATCACTGACTCAGCCTCCCTTGAAGCAGACCCACTCATCATACCCACTGTTGAACATACACTGTATTAA 1644 0.4884 MCNTKPSSTSSFLCPTQTQLLITSHKVMDAPDDHQDELQRWPTLNEVASEIKALGKISGPTAITGLLLYSRAMISMLFLGYLGETELAGGSLSIGFANITGYSVISGLAMGMEPICGQGHGAKQGKLLGLTLQRTVLLLLSTSIPISFMWLNMKTILLWCGQDEAISSMAQTFILFSIPDLFLLSLLHPLRVFLRTQSITLPLTYCSAISVLLHVPLNFLLVVQFKMGIAGVAIAMVWTNLNLFLFLCSFVYFSDVCKDSWVPPSMECLRGWSSLLALAVPTCVSVCLEWWWYELMIMLCGLLGNPKATIASMGILIQTTSLVYVFPSSLSLGVSTRVGNELGANRPGKARISMIVSLFCAVGLGLGAMGFTTLLRHQWGRLFTSDEEILKLTAIALPIAGLCELGNCPQTTGCGVLRGSARPTIGANINLSSFYLVGMPVAILLGFIAKMGFAGLWLGLLAAQASCAGLMLLVLCRTDWNVLAERAKELTSSNTAITAAAVNSGLLPTFTKTESNKTACLKEIVITDSASLEADPLIIPTVEHTLY 547
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere05g2237 547 CDD MATE_eukaryotic 50 486 IPR045069 GO:0042910|GO:1990961
Dere05g2237 547 PANTHER MULTIDRUG RESISTANCE PROTEIN 46 480 - -
Dere05g2237 547 Pfam MatE 281 443 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Dere05g2237 547 Pfam MatE 60 220 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Dere05g2237 547 NCBIfam MATE family efflux transporter 66 457 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere05g2237 Dere-ChrDere05 32527330 32529141 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere05g2237 05 32527330 32529141 Dere05g2237 05 32527330 32529141 ECH