Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere05g2196 ATGTATCGTCCAAAGACGAAAGAGAGAAATGGCAATGGCGAAATGGGAAGGGAAAGCCACTGCACAAGTGGGAAACGCGGAGGCAGACCAAGTATGGCCTCTGCTAGAGGACTTCTGCAACATACACAAGTGGTTGCCCTCGACACGTGTCGCCAGGTGGATGGAGTTGTAGGACAGCCTGGCCTGATTCGTTTCTGCGAATTCACCAAGAAGGGTGAGGGCGACAAGGACACAATCGTGTGGTTGAAAGAGAAGCTGGTGGTGCTGGATCTGATAAAGCGAAGTGTGACGTATGAGGTGGTGGAGAGCAACATGGGATTGAAGTCCTACGTGGCAACCATGAAAGTGGAAGCAGCTCCATCTGGGTGCAACATACACTGGTGCTTCGAGTGTGAACCAGTGGAAGGGTGGACTTATGAGGCTTTGTATTCTTTTATAGATTCTTTTCTTCAGTTCATGGCCAACAAGATGCACCAGGCATTCTCTGCTATCTAG 495 0.499 MYRPKTKERNGNGEMGRESHCTSGKRGGRPSMASARGLLQHTQVVALDTCRQVDGVVGQPGLIRFCEFTKKGEGDKDTIVWLKEKLVVLDLIKRSVTYEVVESNMGLKSYVATMKVEAAPSGCNIHWCFECEPVEGWTYEALYSFIDSFLQFMANKMHQAFSAI 164
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere05g2196 164 CDD PYR_PYL_RCAR_like 46 161 - -
Dere05g2196 164 Gene3D - 33 163 IPR023393 -
Dere05g2196 164 MobiDBLite consensus disorder prediction 1 32 - -
Dere05g2196 164 PANTHER LACHRYMATORY-FACTOR SYNTHASE 44 162 - -
Dere05g2196 164 SUPERFAMILY Bet v1-like 48 160 - -
Dere05g2196 164 Pfam Polyketide cyclase / dehydrase and lipid transport 47 157 IPR019587 -
Dere05g2196 164 MobiDBLite consensus disorder prediction 1 24 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere05g2196 Dere-ChrDere05 32088601 32089095 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere05g2196 05 32088601 32089095 Dere04g0751 04 7563402 7563911 CCT