Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere05g2140 ATGCCAAGCATCGCAGTTCTGTCGGTACTACTGTGCACCGCCTTCCATGTCGCCTTCTCCTTCACTGACGGATTGGTGGCAAATGGGAATTTTGAGCTGGGCCCAAAGCCATCGGACATGAAAGGCACGGTGGTGATCGGCGGCCGCCACGCCATACCGGAGTGGGAGATCTCGGGCTTCGTGGAGTACATAAAATCCGGACAGAAACAAGGTGATATGTTGCTGATGGTACCCGAAGGAGCTTATGCGGTGAGGCTGGGCAATGAGGCCTCAATCAAGCAAAGAATAAAGGTGGTGAAGGGAATGTACTATTCCATCACGTTCGCGGTTGCACGCACATGCGCACAAGAGGAGCGATTGAACGTGTCTGCGTCTCCAGATTCAGGAGTTCTTCCAATGCAGACACTGTATAGCAGCAATGGTTGGGACGCTTATGCTTGGGCCTTCCAAGCTGAATACCCTGAGGTCGACATGGTCATCCATAACCCTGGTGTTGAAGAGGACCCTGCTTGTGGACCACTCATTGATTCTGTTGCTCTCAGAGCTCTCTACCCTCCTAGACCAACCAACAAGAACGCACTAAAGAACGCTGATTTTGAAGAAGGGCCATATGTATTCCCAAACTCATCTATTGGTGTGCTTATCCCAGCCAAGATTGAAGACGACCACTCTCCTCTACCGGGATGGATGGTGGAGTCCTTGAAGGCAGTGAAATACATAGACTCAGACCATTTCTCAGTTCCACAGGGAAGAAGAGCGGTGGAGCTTGTGGCAGGAAAAGAGAGTGTGATTGCACAAGTGGTGAGGACCATTCCTGGCAAGAGCTACGTCCTCTCATTTGCAGTGGGAGACGCCAACAATTCCTGTGAAGGGTCTATGGTTGTGGAAGCATTCGCAGGCAAAGACACTATCAAAGTGCCTTACCAGTCCAAAGGCAAAGGTGGGTCTAAGCGTGCGGCTCTTAGGTTTGTGGCTGTTAGCCCAAGAACACGGATTGTGTTCTTTAGCACATTCTACACCATGAGAAGCGACGACTTGTCTTCGCTGTGTGGGCCTGTGGTTGACGATGTCAAGTTGCTCAGTCTTCGTAAACCTTAG 1098 0.5091 MPSIAVLSVLLCTAFHVAFSFTDGLVANGNFELGPKPSDMKGTVVIGGRHAIPEWEISGFVEYIKSGQKQGDMLLMVPEGAYAVRLGNEASIKQRIKVVKGMYYSITFAVARTCAQEERLNVSASPDSGVLPMQTLYSSNGWDAYAWAFQAEYPEVDMVIHNPGVEEDPACGPLIDSVALRALYPPRPTNKNALKNADFEEGPYVFPNSSIGVLIPAKIEDDHSPLPGWMVESLKAVKYIDSDHFSVPQGRRAVELVAGKESVIAQVVRTIPGKSYVLSFAVGDANNSCEGSMVVEAFAGKDTIKVPYQSKGKGGSKRAALRFVAVSPRTRIVFFSTFYTMRSDDLSSLCGPVVDDVKLLSLRKP 365
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere05g2140 365 Pfam Protein of unknown function (DUF642) 24 181 IPR006946 -
Dere05g2140 365 Pfam Protein of unknown function (DUF642) 193 359 IPR006946 -
Dere05g2140 365 Gene3D - 188 360 - -
Dere05g2140 365 SUPERFAMILY Galactose-binding domain-like 22 181 IPR008979 -
Dere05g2140 365 PANTHER OS02G0527500 PROTEIN-RELATED 6 361 - -
Dere05g2140 365 FunFam DUF642 family protein 188 359 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere05g2140 Dere-ChrDere05 31563800 31565759 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere05g2140 05 31563800 31565759 Dere05g2140 05 31563800 31565759 ECH