Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere05g2061 ATGCAACCCCAGCAGAGTTCAAGAATTGATTTGGCTGAATTGAAAGCACAAATTATAAAGAAGATTGGAGTTGATAAGTCAAAACGGTACTTTTATTACTTGAACAGGTTTCTCAGTCAGAAGCTGGGCAAGCCTGAATTTGATAAGCTATGTATTCGGGTACTTGGGAGGGAGAATCTTCCACTGCACAATCATTTTATAAGATCTATTTTGAAGAATACATGCCAAGCCAAGACCCCACCACCTATCCAGCCATCAGTTCCCCCAAAGTTTGGAACACATGTTACCAACATATCTCCTGGTAGAGAAGATGGTCATGAACCAAATGGTGCCACTGGCCAGAATCATAATCAAAATGCACCCATTTGGTCAAATGGGGTTTTACCAGTGTCCCCACGTAAGGTAAGGTCTGTAATACGTGAGCGGAAGCACAGAGATAGACCAAGCCCACTTGGACCGAATGGGAAGGTTGATTCTGTTTCTCATCAATCCACAGGTACAGAAGACAGTGGTAGTAAGGGTGATATGGAGAATGGGACTCTCACCCCATGTGATTATCAAAGACCAATACAGCATCTTCGAGCTGTTGCTGAGTTACCTGAAGATGAAAGAGGAGATACCGTTCAGAGACCTGCTAATAAACTGAGAATACATGGCCAAGGGCAGACTGAAGCTTTAGTTGTTGAAGATGGGGAAGAAGTGGAGCAGTCAAACCGCCTAAATTTCTTTAGAAGCCCCCTGCTAGCTCCGCTTGGGATTCCATACTGTTCAGCAAGTGTGGGTGGGGCCCGCAAAGCTTTGCCTGTGACTGGTGATTTTGTTAGTTGTTATGATAGTGGTTGGTTGTCTGACACAGACACATTGAGAGGGCGCATGGAGCAGATTGCTGCTGTGCAGGGTCTTGGGGGTGTTTCTATGGAAAGCTCCAATATGTTGAATAATATGTTGGATGTCTACTTGAAGCGGTTGATAACATCTTGTGTTGATTTAGTGGGAGCTAGGCCTACAAATGAGCCGAGGAAGGCCCCTGATCAGAAACAGCAGATTCAGGGTAAGGTCATCAATGGCATGTGGCCAAGTAATCATATACATGTGCAGAGTGCTGGTGGGCCAGCAGAAGCTGTACCTGGACACATACAGTCATGCTCAGTATCTTTGCTTGATTTTAAAGTTGCCATGGAGCTGAATCCACAGCAACTTGGAGAAGATTGGCCATTGCTATTGGAGAAAATTTCTATGAATGCATTTGAGGAATAA 1257 0.4463 MQPQQSSRIDLAELKAQIIKKIGVDKSKRYFYYLNRFLSQKLGKPEFDKLCIRVLGRENLPLHNHFIRSILKNTCQAKTPPPIQPSVPPKFGTHVTNISPGREDGHEPNGATGQNHNQNAPIWSNGVLPVSPRKVRSVIRERKHRDRPSPLGPNGKVDSVSHQSTGTEDSGSKGDMENGTLTPCDYQRPIQHLRAVAELPEDERGDTVQRPANKLRIHGQGQTEALVVEDGEEVEQSNRLNFFRSPLLAPLGIPYCSASVGGARKALPVTGDFVSCYDSGWLSDTDTLRGRMEQIAAVQGLGGVSMESSNMLNNMLDVYLKRLITSCVDLVGARPTNEPRKAPDQKQQIQGKVINGMWPSNHIHVQSAGGPAEAVPGHIQSCSVSLLDFKVAMELNPQQLGEDWPLLLEKISMNAFEE 418
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere05g2061 418 MobiDBLite consensus disorder prediction 80 128 - -
Dere05g2061 418 MobiDBLite consensus disorder prediction 140 184 - -
Dere05g2061 418 MobiDBLite consensus disorder prediction 110 125 - -
Dere05g2061 418 PANTHER TRANSCRIPTIONAL ADAPTER 1 1 417 IPR024738 GO:0070461
Dere05g2061 418 Pfam Transcriptional regulator of RNA polII, SAGA, subunit 4 331 IPR024738 GO:0070461
Dere05g2061 418 MobiDBLite consensus disorder prediction 156 177 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere05g2061 Dere-ChrDere05 30700382 30701638 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere05g2061 05 30700382 30701638 Dere04g0659 04 6573575 6574837 CCT
Dere05g2061 05 30700382 30701638 Dere05g2061 05 30700382 30701638 ECH