LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Dere05g2007	ATGCCACCAATATTGCATTTCTTGATGGACTACTGCTGCCTCAGAGAAATAGAAGGAAAGCAAACACATGACCCTTTATTCGCAGACAAAATGAGCAACAAATCGTCGTTTTCGCAGCGACGATGCGTCTGGGTTCCTGGCCCTGTAATTGTAGGAGCAGGGCCTTCAGGGCTCGCTGTAGCAGCTTGTCTTAAACAGAAAGGCGTCCCAAGCGTACTTCTAGAAAGATCTAATTGCATAGCTTCTCTGTGGCAACTCAAGACCTACGATCGTCTTCACCTTCATTTACCCAAGCAATTCTGCGAGCTCCCTCTCATGGGGTTCCCCTCCGATTTCCCAACATACCCCACGAAGCAACAGTTCATTGACTACTTAGAGAGCTATGCAGAGAGGTTCGATATTAGGCCCAGGTTCAATGAGACGGTGAAGGAAGCGGAATTCGACTCCACGCTTGGGTTTTGGCGCGTAAGGAGTGTGGGAAAGGCGGACATGACGTCCACGGAATACGTGTGCCGGTGGCTGATTGTGGCCACCGGAGAGAATGCGGAGGCGGTGGTGCCGGAGTTTGACGGAGCGGAGGAGTTTGGAGGGCCCATAAAGCACACCAGCTTGTACAAGAGGGGTGAGGAGTTGAGAGGGAAGAGGGTTTTGGTGGTGGGGTGTGGCAATTCAGGCATGGAAGTGTGCTTGGATCTTTGCAACCATAATGCTAGCCCTTCTCTTGTGGTCAGAGATACAGTGCACGTCCTACCACGAGAGATGCTGGGAATATCAACTTTCGGGCTGTCCATGTGGTTGCTCAAGTGGCTTCCCATAGGGCTGGTGGATCGCTTCCTACTGATGGTGTCGTGGCTGTTGCTGGGCGACACTTCTCGCTTCGGATTGATTCGACCTCGCTTGGGTCCCCTTCAGCTCAAGAACCTCTCCGGTAAGACCCCAGTCCTCGATGTGGGTACCCTCGCCAAGATCAAAAGCGGACACATCAAGGTTTGTCCGGGCATTAAGCGGCTAAAACGTCACACTGTGGAATTTGTTGATGGAACGACAGAGAATTTCGATGCCATCATATTGGCAACAGGTTACAAAAGCAATGTACCCTCTTGGCTAAAGGAAGGAAGTATGTTCTCTAGAGAGGATGGGTTCCCAAGAAGGCCATTCCCAAATGGGTGGAAGGGAGAGTGTGGACTGTACGCAGTGGGTTTTACCAAACGAGGACTACTTGGTACATCTATGGATGCCAAAAGAATAGCTGAAGATATTGAACGGTGCTGGCAAGCTGAGGCAAAGCATAGTACTGCTTTTACTCGTTCACTTTTGCCACAAACAAATTCATGA	1335	0.5049	MPPILHFLMDYCCLREIEGKQTHDPLFADKMSNKSSFSQRRCVWVPGPVIVGAGPSGLAVAACLKQKGVPSVLLERSNCIASLWQLKTYDRLHLHLPKQFCELPLMGFPSDFPTYPTKQQFIDYLESYAERFDIRPRFNETVKEAEFDSTLGFWRVRSVGKADMTSTEYVCRWLIVATGENAEAVVPEFDGAEEFGGPIKHTSLYKRGEELRGKRVLVVGCGNSGMEVCLDLCNHNASPSLVVRDTVHVLPREMLGISTFGLSMWLLKWLPIGLVDRFLLMVSWLLLGDTSRFGLIRPRLGPLQLKNLSGKTPVLDVGTLAKIKSGHIKVCPGIKRLKRHTVEFVDGTTENFDAIILATGYKSNVPSWLKEGSMFSREDGFPRRPFPNGWKGECGLYAVGFTKRGLLGTSMDAKRIAEDIERCWQAEAKHSTAFTRSLLPQTNS	444

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Dere05g2007	444	FunFam	Flavin-containing monooxygenase	48	429	-	-
	Dere05g2007	444	PRINTS	FAD-dependent pyridine nucleotide reductase signature	171	189	-	-
	Dere05g2007	444	PRINTS	FAD-dependent pyridine nucleotide reductase signature	48	67	-	-
	Dere05g2007	444	PRINTS	FAD-dependent pyridine nucleotide reductase signature	215	233	-	-
	Dere05g2007	444	Gene3D	-	48	429	IPR036188	-
	Dere05g2007	444	PRINTS	Pyridine nucleotide disulphide reductase class-II signature	211	235	-	-
	Dere05g2007	444	PRINTS	Pyridine nucleotide disulphide reductase class-II signature	47	69	-	-
	Dere05g2007	444	SUPERFAMILY	FAD/NAD(P)-binding domain	49	248	IPR036188	-
	Dere05g2007	444	SUPERFAMILY	FAD/NAD(P)-binding domain	213	422	IPR036188	-
	Dere05g2007	444	PANTHER	FLAVIN-BINDING MONOOXYGENASE-LIKE PROTEIN (AFU_ORTHOLOGUE AFUA_4G09220)	49	430	-	-
	Dere05g2007	444	Pfam	Flavin-binding monooxygenase-like	50	366	IPR020946	GO:0004499\|GO:0050660\|GO:0050661

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Dere05g2007	Dere-ChrDere05	30030876	30033628	Dispersed/Wgd

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Dere05g2007	05	30030876	30033628	Dere05g2007	05	30030876	30033628	ECH