Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Dere05g2000 ATGGCTTCTTTCTCTCAACCTCCTTCCTTTAAACCCAACTCCAAAAGATCCCTCATATTGCCTCGTCTTCCTCTTTATGGAACATCTCCTGAACCTCATAGAACTGTTCCATATCCTTGGTTCGGGGTTCGATCTCGCATAGTGTGCAAGATGAATGAATCAGATATGATTTCACAGCTGGAACTTGGAAAATCTGAGGACAGACGGAAACCGGCCAAACGTGTGACCGGGATATTCTGGATCATACTGCTTAATATTGGAATATATGTGGCAGATCATTTCTTTCAGGTTCGTAGCGTCAAAGTTTTGTACTTGTACCATAACTGGCCTGCTTGGTATCAGTTTCTCACAGCAACATTTTGCCATGCTAATTGGAAGCATCTTTCTAGCAACCTTTTCTTCTTGTACATTTTTGGAAAGCTTGTTGAAGAAGAGGAAGGGAACTTTGCTTTGTGGCTTTCTTACATTCTTACCGGTATTGGAGCAAACCTTGTTTCATGGTTGGTTCTACCGCGAAATGCAGTTTCTGTTGGAGCTTCTGGTGCAGTTTTTGGGTTATTTACAATCAGTGTCCTTGTAAAGATTTCCTGGGATTGGAGAAAGATTCTTGAAGTGCTTATATTGGGGCAGTTTGTAATAGAGAAGGTTATGGAAGCAGCCCAAGCTTCGACAGTATCAGGCTCCTTTCGCGGAGGCTACTTAATGCAAAGTGTCAATCACATTGCGCATCTTTCTGGTGCTCTTGTTGGCGTGCTTTTAGTCTGGCTGCTTAGCAAAGTACCCTCTGATTCTTCAGATCAAGCATCCACTTTGGGCAAGAAAACGGGAAGAACTCGGTAG 840 0.431 MASFSQPPSFKPNSKRSLILPRLPLYGTSPEPHRTVPYPWFGVRSRIVCKMNESDMISQLELGKSEDRRKPAKRVTGIFWIILLNIGIYVADHFFQVRSVKVLYLYHNWPAWYQFLTATFCHANWKHLSSNLFFLYIFGKLVEEEEGNFALWLSYILTGIGANLVSWLVLPRNAVSVGASGAVFGLFTISVLVKISWDWRKILEVLILGQFVIEKVMEAAQASTVSGSFRGGYLMQSVNHIAHLSGALVGVLLVWLLSKVPSDSSDQASTLGKKTGRTR 279
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Dere05g2000 279 FunFam Rhomboid protease aarA 73 262 - -
Dere05g2000 279 SUPERFAMILY Rhomboid-like 78 260 IPR035952 -
Dere05g2000 279 Pfam Rhomboid family 112 259 IPR022764 GO:0004252|GO:0016020
Dere05g2000 279 Gene3D - 72 267 IPR035952 -
Dere05g2000 279 PANTHER RHOMBOID-RELATED PROTEIN 34 268 - -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Dere05g2000 Dere-ChrDere05 29934979 29937031 Transposed
       

Event-related genes


Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere05g2000 05 29934979 29937031 Dere05g2000 05 29934979 29937031 ECH