Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere05g1907 ATGGACTTCCCACTGTGGAGCACAGCAAACATCTACTTGGCAAAAACTGAGGAAACTAGAAAGAGAAGCGAGCAAGAGCACAAGATGCAGAGATTGAAAGCTCTGCTACCAGAGACTCGGTGCTTATTCCGCAGCTTTCATTGTAGAGGCTTCTCTGCCCAACCAAACTATGTCGAGCATGATGACCCCCAAGACCAGATTTTAGTTGAAGGAAGAGCTATATCGAGAGCTGCTATTCTCAACAGACCATATTCTCTTAATGCCCTCACTACATCGATGGTAGCTCGACTGAAGAGATTGTATACTTCATGGGAAGATAATCCTGATATTGGCTTTGTTCTAATGAAGGCTAATGGCAGGGCTTTCTGTTCTGGTGGAGATGTTGTAAGGCTTTATCACTTACTGGATCAAGGAAATGCTGAAGAAGCTAAACAGTTTTTCAAGACATTATATATGTTTGTATATCTTCAAGGGACATATCTGAAGCCACATGTTGCTATTTTGGATGGCATAACAATGGGATGTGGTGCTGGTATTTCATTTCCAGGGATGTTCCGTGTGGTAACTGACAAAACTCTTTTTGCTAACCCAGAGGCTCAAATGGGTTTTCACCCTGATGCAGGAGCTTCCTTTTATCTCTCTCGTTTACCTGGCTACTTAGGGGAATACTTTGCCCTTTCAGGAGACAAGCTTAATGGTGTAGAGATGATTGCCTGTGGCCTTGCTACTCACTATACACTTAATGCCAGGCTTGCTTTGCTTGAAGAACGCCTTGGTAAACTGGCCACAGATGATGCTTCTCTTGTGGAGTCAACCCTTGCGCAGTATGGTGATCTTGTTTATCCTGACAGTAGGAGCATTCTTAACAAGATTGATACAATTGATAAGTGTTTCAGCCATGACACGGTTGAGGAAATTATTGATGCTTTGGAGAAGGAAGCAGCGGAGTCTTATGATGCATGGTGTACAACAACACTTAAAAAGATACGAGAAGCCTCGCCACTGAGTTTGAAAGTTACTTTAAGATCTATTCGCGAAGGTAGATTTCAAACTCTTGATAAATGTCTTATGCGTGAATACCGGATATCACTTCGTGGAATTTCTAAGCAGGTCTCCTCTGATTTCCTTGAGGGTGTTCGAGCAAGACTGGTCGATAAAGATTTTGCACCGAGGTGGGACCCACCTAGTTTAAAAGAAGTATCAGAGGACATGGTTGAACACTATCTCTCTCCATTTAACGAAGTTGAGTCTGAACTGGAGCTGCCCACCACTTTGCGGGAACCTTATATATGGAGATCTACTAGGGTTACATTCATCATGCTTGATACTGTGAAAGCCATAAGGAAAGCTATGATTGATGATGGACTTCCCTGCAGCCATGCCATGGCTGAATTATGTTTCAAGAGTGGAGAACATGATTAA 1422 0.429 MDFPLWSTANIYLAKTEETRKRSEQEHKMQRLKALLPETRCLFRSFHCRGFSAQPNYVEHDDPQDQILVEGRAISRAAILNRPYSLNALTTSMVARLKRLYTSWEDNPDIGFVLMKANGRAFCSGGDVVRLYHLLDQGNAEEAKQFFKTLYMFVYLQGTYLKPHVAILDGITMGCGAGISFPGMFRVVTDKTLFANPEAQMGFHPDAGASFYLSRLPGYLGEYFALSGDKLNGVEMIACGLATHYTLNARLALLEERLGKLATDDASLVESTLAQYGDLVYPDSRSILNKIDTIDKCFSHDTVEEIIDALEKEAAESYDAWCTTTLKKIREASPLSLKVTLRSIREGRFQTLDKCLMREYRISLRGISKQVSSDFLEGVRARLVDKDFAPRWDPPSLKEVSEDMVEHYLSPFNEVESELELPTTLREPYIWRSTRVTFIMLDTVKAIRKAMIDDGLPCSHAMAELCFKSGEHD 473
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere05g1907 473 PANTHER 3-HYDROXYISOBUTYRYL-COA HYDROLASE-RELATED 64 424 IPR032259 GO:0003860
Dere05g1907 473 CDD crotonase-like 80 264 - -
Dere05g1907 473 FunFam Probable 3-hydroxyisobutyryl-CoA hydrolase 2 61 425 - -
Dere05g1907 473 Coils Coil 13 35 - -
Dere05g1907 473 Gene3D - 61 425 - -
Dere05g1907 473 SUPERFAMILY ClpP/crotonase 79 395 IPR029045 -
Dere05g1907 473 Pfam Enoyl-CoA hydratase/isomerase 77 409 IPR045004 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere05g1907 Dere-ChrDere05 28979382 28988504 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere05g1907 29 429 Acyl Lipid Metabolism Gene Families AT4G31810 68.137 0.0 573
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere05g1907 05 28979382 28988504 Dere05g1907 05 28979382 28988504 ECH