Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere05g1905 ATGGAACTTGCGACTACTCTTTCCTCCCCTTCGTTCTTCCACCTTATAGCTCCCGACAACGGACATAACAACAACCATTTGAAAGGGCACTTCTCCCTCTTTAGATCTAACCCATCCTCTCTCCCGATCTCGAACGCCATGGCGTTTTTGAGATCTATTGCCTTCCCTACGCTGATGTTCTGTGGGATTCTTCTGCTTCTCATCCATGGCGCTCACTGTTTCTATCTCCCTGGCGTCGCTCCACAGGACTTCGAAAAGGGAGATCTATTGCAAGTGAAAGTTAATAAATTAACGTCAACGAAGACTCAACTTCCTTACTCATATTATTCACTTCCATATTGTCGCCCAGAAAAAATACAGGATAGTGCAGAAAATCTTGGGGAAGTACTTCGGGGTGATCGCATTGAAAATTCTCATTATGTGTTTAAAATGCGCGAGCCAAAAATGTGCAGTGTTGTGTGTCAGCTTACACTTGATGCCAAAACTGCAAAGGAGTTCAAAGAGAAGATTGATGATGAGTATCGTGTGAATATGATCCTAGATAATCTTCCTCTGGTTGTTCCCCTAAAACGAATGGATCAGGATTCTACTGTTTATCAGCTTGGTTTCCATGTTGGACTTAAAGGCCAATATAGTGGGAGCAAAGAGGAGAAGCATTTCATCCACAACCATTTGGCATTTACTGTCAAATATCATAGGGATTTGCAAACTGACTCTGCCAGAATTGTGGGTTTTGAGGTTAAGCCATTCAGTGTTAAACATGAATATGAAGGAAAATGGGATGAGAAAAGTCGTTTGACAACCTGTGACCCTCACACTAAGCGCACAGTTGTCAACTCTAACATTCCCCAAGAGGTCGAAGAGAACAAGGAAATTATATTCACATATGACGTTGAATTCCAGGAGAGTGACGTGAAGTGGGCTTCACGATGGGATGCCTATCTGCTCATGAGTGATGACCAAATTCACTGGTTCTCTATTGTGAACTCATTGATGATTGTTCTCTTCCTGTCGGGCATGGTGGCAATGATAATGCTTCGGACACTTTACCGTGACATTTCAAAATACAATGAGCTTGAGACTCAAGAGGAAGCCCAAGAAGAGACTGGTTGGAAGCTCGTTCACGGGGATGTTTTTAGACCCCCTAACAGCTCGGATCTGCTCTGTGTCTATGTTGGAACTGGCGTTCAATTTTTCGGGATGCTATTAGTAACCATGATATTTGCCATCCTTGGGTTCCTCTCTCCTTCAAACCGAGGTGCGCTAATGACGGCTATGCTTTTGCTTTGGGTCTTCATGGGACTTTTTGCTGGTTACTCCTCATCACGCCTGTACAAAATGTTCAAAGGATCGGAGTGGAAGAAAATTGCCCTTAGGACTGCTATCATGTTCCCAGCTATCGTCTCTGCCATTTTCTTTGTATTGAACGCTCTTATATGGGGTCAAAAATCATCTGGAGCTGTGCCTTTTGGTACAATGTTTGCTCTGATCTTTTTATGGTTTGGAATCTCGGTTCCACTTGTTTTTGTGGGTAGCTACGTTGGATTCAAGAAGCCTGCTATTGAGAATCCCGTGAAGACAAACAAAATCCCAAGGCAGATTCCTGAGCAGGCTTGGTACATGAATCCGGTCTTCTCAGTTCTCATTGGAGGAATACTCCCATTTGGAGCCGTTTTCATTGAGCTTTTCTTCATCCTCACCTCAATCTGGTTGAATCAGTTTTACTACATCTTCGGTTTCCTTTTTTTGGTCTTCGTCATCCTCATCGTTACTTGTGCAGAAATAACCATTGTGCTTTGCTACTTCCAGCTGTGCAGTGAGGATTATTTGTGGTGGTGGCGGTCATACCTCACATCTGGCTCTTCTGCAATTTACCTCTTCCTCTATGCCACATTCTACTTCTTCACCAAGCTTGAAATTACAAAGATGGTATCTGCTATATTGTACTTCGGGTACATGCTTATAGCTTCGTATGCATTTTTTGTGCTAACCGGCACCATCGGATTCTATGCGTGCTTTTGGTTTACAAGGCTTATCTACTCCTCGGTGAAAATTGATTAG 2061 0.4323 MELATTLSSPSFFHLIAPDNGHNNNHLKGHFSLFRSNPSSLPISNAMAFLRSIAFPTLMFCGILLLLIHGAHCFYLPGVAPQDFEKGDLLQVKVNKLTSTKTQLPYSYYSLPYCRPEKIQDSAENLGEVLRGDRIENSHYVFKMREPKMCSVVCQLTLDAKTAKEFKEKIDDEYRVNMILDNLPLVVPLKRMDQDSTVYQLGFHVGLKGQYSGSKEEKHFIHNHLAFTVKYHRDLQTDSARIVGFEVKPFSVKHEYEGKWDEKSRLTTCDPHTKRTVVNSNIPQEVEENKEIIFTYDVEFQESDVKWASRWDAYLLMSDDQIHWFSIVNSLMIVLFLSGMVAMIMLRTLYRDISKYNELETQEEAQEETGWKLVHGDVFRPPNSSDLLCVYVGTGVQFFGMLLVTMIFAILGFLSPSNRGALMTAMLLLWVFMGLFAGYSSSRLYKMFKGSEWKKIALRTAIMFPAIVSAIFFVLNALIWGQKSSGAVPFGTMFALIFLWFGISVPLVFVGSYVGFKKPAIENPVKTNKIPRQIPEQAWYMNPVFSVLIGGILPFGAVFIELFFILTSIWLNQFYYIFGFLFLVFVILIVTCAEITIVLCYFQLCSEDYLWWWRSYLTSGSSAIYLFLYATFYFFTKLEITKMVSAILYFGYMLIASYAFFVLTGTIGFYACFWFTRLIYSSVKID 686
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere05g1905 686 PANTHER TRANSMEMBRANE 9 SUPERFAMILY PROTEIN 73 686 IPR004240 GO:0016020
Dere05g1905 686 SUPERFAMILY MFS general substrate transporter 324 510 IPR036259 -
Dere05g1905 686 Pfam Endomembrane protein 70 105 642 IPR004240 GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere05g1905 Dere-ChrDere05 28952871 28958333 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere05g1905 46 686 Miscellaneous Gene Families AT5G10840 85.317 0.0 1125
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere05g1905 05 28952871 28958333 Dere04g0494 04 4959137 4962520 CCT
Dere05g1905 05 28952871 28958333 Dere05g1905 05 28952871 28958333 ECH