Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere05g1800 ATGGAGGAAGGTTTTCTTAGAAGCAAGTTCAAGAGGGTCTGTGTCTTCTGCGGTAGCAACTCCGGCAATAGGGAAGTCTTCAGTGACGCTGCGATTGAATTGGGCAATGAACTGGTGAAGAGGAAGATAGACTTGGTTTATGGTGGTGGAAGTGTTGGGCTGATGGGCTTAATATCTCAGAGAGTGTACGATGGAGGCTGCCGTGTCCTTGGGATCATTCCGAAAGCTCTCATGCCTATTGAGATATCTGGGGAAACAATAGGAGAAGTAAGAATTGTTTCAGATATGCATGAGCGTAAAGCTGCAATGGCTCAAGAAGCTGATGCATTTATTGCTCTCCCTGGAGGGTATGGAACCATGGAAGAGCTGTTGGAGATGATAACTTGGGCCCAACTTGGAATTCATAAGAAACCGGTTGGTGTACTGAATGTTGATGGTTACTATAACTGTTTGCTTGCTTTATTTGACAATGGTGTTGAAGAAGGCTTCATTAAGCCTGGTGCTCGGAATATAATTATTTCTGCTCCAACGGCCAAAGAACTTGTGATGAAGATGGAGCATTACACTCCTTCACACGAACATGTCGCCCCTCATGAGAGCTGGCAGATGGAGCAACTGGGTAATTATCCGGGACAAGAAAATGCAGAATGA 651 0.4516 MEEGFLRSKFKRVCVFCGSNSGNREVFSDAAIELGNELVKRKIDLVYGGGSVGLMGLISQRVYDGGCRVLGIIPKALMPIEISGETIGEVRIVSDMHERKAAMAQEADAFIALPGGYGTMEELLEMITWAQLGIHKKPVGVLNVDGYYNCLLALFDNGVEEGFIKPGARNIIISAPTAKELVMKMEHYTPSHEHVAPHESWQMEQLGNYPGQENAE 216
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere05g1800 216 PANTHER LOG FAMILY PROTEIN YJL055W 7 210 - -
Dere05g1800 216 Gene3D - 9 204 - -
Dere05g1800 216 NCBIfam Rossman fold protein, TIGR00730 family 11 188 IPR005269 GO:0009691|GO:0016787
Dere05g1800 216 SUPERFAMILY MCP/YpsA-like 8 185 - -
Dere05g1800 216 FunFam Cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG8 10 204 - -
Dere05g1800 216 Pfam Possible lysine decarboxylase 55 185 IPR031100 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere05g1800 Dere-ChrDere05 27776241 27778367 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere05g1800 05 27776241 27778367 Dere04g0418 04 4301983 4303903 CCT