Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere05g1768 ATGGCTCTTCTCAGCCGAACCTCCTCGCGCCTCCCTCAGCTTGTGTCGCCTCAACGTGTAGTTTCTCTCCACTCCACCCTGCCTTCCCTCTCTTCCGCCGCATCGTCCGGCACATCCACGCCGACAACATATGCTCGGCCACTACCCCCATCTGCTTCCTCCCCTCCCGGTCTTTCCAAGGCCGCGGAGTACGTGATCTCCAAGGTTGATGATCTCCTCAACTGGGCTCGTCGTGGTTCCATCTGGCCTATGACCTTCGGTCTTGCTTGCTGCGCAGTCGAAATGATGCACACCGGGGCCTCCCGTTACGATCTCGATCGATTCGGTATCATTTTCAGGCCCAGCCCTCGCCAGTCCGATTGTATGATTGTTGCCGGCACTCTCACCAACAAGATGGCCCCTGCCCTCCGCAAGGTTTATGACCAAATGCCCGAGCCTAGATGGGTCATCTCCATGGGAAGTTGTGCTAATGGAGGAGGATACTACCACTACTCCTACTCAGTTGTTCGAGGATGCGATAGGATAGTTCCTGTCGACATATATGTTCCAGGCTGTCCTCCAACTGCTGAGGCCTTGCTATATGGACTCCTCCAGCTGCAGAAGAAGATCGATAGGCGCAAGGACTTCCTCATGTGGTGGACAAAGTGA 648 0.5556 MALLSRTSSRLPQLVSPQRVVSLHSTLPSLSSAASSGTSTPTTYARPLPPSASSPPGLSKAAEYVISKVDDLLNWARRGSIWPMTFGLACCAVEMMHTGASRYDLDRFGIIFRPSPRQSDCMIVAGTLTNKMAPALRKVYDQMPEPRWVISMGSCANGGGYYHYSYSVVRGCDRIVPVDIYVPGCPPTAEALLYGLLQLQKKIDRRKDFLMWWTK 215
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere05g1768 215 PANTHER NADH DEHYDROGENASE 59 214 - -
Dere05g1768 215 ProSitePatterns Respiratory-chain NADH dehydrogenase 20 Kd subunit signature. 171 187 IPR006138 GO:0008137|GO:0048038|GO:0051539
Dere05g1768 215 SUPERFAMILY HydA/Nqo6-like 63 208 - -
Dere05g1768 215 MobiDBLite consensus disorder prediction 29 47 - -
Dere05g1768 215 Gene3D - 61 215 - -
Dere05g1768 215 Pfam NADH ubiquinone oxidoreductase, 20 Kd subunit 90 199 IPR006137 GO:0051536
Dere05g1768 215 NCBIfam NADH-quinone oxidoreductase subunit B 65 205 IPR006138 GO:0008137|GO:0048038|GO:0051539
Dere05g1768 215 Hamap NAD(P)H-quinone oxidoreductase subunit K, chloroplastic [ndhK]. 56 204 IPR006138 GO:0008137|GO:0048038|GO:0051539
Dere05g1768 215 FunFam NADH-quinone oxidoreductase subunit B 2 57 215 - -
Dere05g1768 215 MobiDBLite consensus disorder prediction 29 57 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere05g1768 Dere-ChrDere05 27473903 27475745 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere05g1768 05 27473903 27475745 Dere05g1768 05 27473903 27475745 ECH