Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere05g1756 ATGGCGTCTTCTTCTCCTCCGTCGTATCAGACGAACGTTCCTCTCCTCTCAGCTTCTCAAACTGATGACAAGCCTCTGGATCATGAAGATCACTCGACTCCCGTTCCAATTCATATTGTCACCACTGCATCTCAACTTCCTGTTGAATTCCTCGAGCCCTCACCTGAAAAGCAGCTCGTCATTGGTTTCGATTGCGAGGGTGTTGACTTATGTCGCAATGGCGCTCTATGCATAATGCAGCTTGCATTTCCAGATGCTATATACCTGGTTGATGCAATCGAAGGGGGAGAGATGCTTATCAGAGCCTGCAAGCCTGCACTTGAGTCTAGTTACATAACAAAAGTGATTCATGATTGCAAACGAGATAGTGAGGCATTGTATTTTCAATTTGGCATCAAGTTGAACAACGTTGTGGATACCCAGATTGCTTATTCACTAATAGAGGAACAAGAAGGACGGAAGAGATTGTCAGATGACTACATTTCATTTGTTGGCCTCCTTGCAGATCCACGTTATTGTGGTATATCATATCTTGAGAAAGAAGAAGTTCGAGTCCTCCTTCGGCAGGACCCCAAGTTTTGGACATACAGACCATTATCTGAACTAATGGTCCGTGGAGCTGCTGATGATGTTCGCTTTCTCCTCTACATTTATCACCAGATGATGGAGAAATTAAATGAACGGTCTCTATGGTATCTTGCCGTTCGAGGTGCCCTGTATTGCCGATGCTTTTGTGTCAACAATGATGATTATGCCGATTGGCCACCTCTACCTCCTCTTCCAGATAACTTGACAGTGGATGGAAATCCTCCTGAGGAAGAAATCCTTTCAGTTCTTGATGTTCCCCAAGGAAATATGGGACGTGTTATCGGGAGAAGAGGGGCTTCAATTTTATCAATTAAGGAGTCCTGCAATGCGGAAATTCTCATAGGAGGTGCCAAGGGCCCACCTGACAAGGTTTTTATCATGGGACCAGTGAAGCAGGTGAGGAAAGCTGAGGCCATGTTAAGGGGCAGAATGTTGGATGTGCAGTGA 1035 0.4531 MASSSPPSYQTNVPLLSASQTDDKPLDHEDHSTPVPIHIVTTASQLPVEFLEPSPEKQLVIGFDCEGVDLCRNGALCIMQLAFPDAIYLVDAIEGGEMLIRACKPALESSYITKVIHDCKRDSEALYFQFGIKLNNVVDTQIAYSLIEEQEGRKRLSDDYISFVGLLADPRYCGISYLEKEEVRVLLRQDPKFWTYRPLSELMVRGAADDVRFLLYIYHQMMEKLNERSLWYLAVRGALYCRCFCVNNDDYADWPPLPPLPDNLTVDGNPPEEEILSVLDVPQGNMGRVIGRRGASILSIKESCNAEILIGGAKGPPDKVFIMGPVKQVRKAEAMLRGRMLDVQ 344
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere05g1756 344 Pfam 3'-5' exonuclease 38 225 IPR002562 GO:0003676|GO:0006139|GO:0008408
Dere05g1756 344 SUPERFAMILY Ribonuclease H-like 7 255 IPR012337 -
Dere05g1756 344 SMART 35exoneu6 37 226 IPR002562 GO:0003676|GO:0006139|GO:0008408
Dere05g1756 344 SMART kh_6 273 341 IPR004087 GO:0003676
Dere05g1756 344 MobiDBLite consensus disorder prediction 1 32 - -
Dere05g1756 344 PANTHER EGALITARIAN, ISOFORM B 27 341 - -
Dere05g1756 344 Pfam KH domain 279 337 IPR004088 GO:0003723
Dere05g1756 344 MobiDBLite consensus disorder prediction 1 19 - -
Dere05g1756 344 CDD KH-I 278 337 - -
Dere05g1756 344 Gene3D K Homology domain, type 1 263 340 IPR036612 GO:0003723
Dere05g1756 344 CDD Egl_like_exo 50 245 - -
Dere05g1756 344 Gene3D - 2 240 IPR036397 GO:0003676
Dere05g1756 344 ProSiteProfiles Type-1 KH domain profile. 274 336 - -
Dere05g1756 344 SUPERFAMILY Eukaryotic type KH-domain (KH-domain type I) 269 342 IPR036612 GO:0003723
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere05g1756 05 27325419 27330174 Dere05g1756 05 27325419 27330174 ECH