Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere05g1741 ATGGCAGATCAATACGCGCTTGGTTGGATCTTTTGCTCTGTGCTCGGCTTGGTTGCCCTCTACCATTTGGCTCTGCCCAGGAAGAGGAACCCTATCGTTTCCCCCGGGGCACCGCCTCAGACTCAGTGCATGAAAAGCATAACCACCGCCGGCGAAGAATGCCGATCAGTAAGCCACGACCGTGAGGTTGACGTCATCATCGTCGGTGCTGGTGTTGCTGGCTCTGCTCTGGCTCATACTCTTGGCAAGGATGGACGCCAAGTACATGTTATAGAAAGAGATTTGAGTGAGCCTGACCGAATTGTGGGGGAGTTGCTACAACCTGGGGGCTATCTCAAACTAATTGAGCTCGGACTTGAAGATTGTGTGCGGGAAATTGATGCTCAGCAAGTGTTTGGTTATGCTCTTTACAAGGATGGAAAACATACTCGACTCCCTTATCCATTGGAGAAGTTTCACTCAGATGTCTCCGGTAGAAGCTTTCACAATGGACGTTTTATTCAGAGGATGAGGGAGAAGGCTGCCTCCCTTCCCAATGTACGATTGACACAAGGAACAGTTACTTCCCTACTTGAAGAGAATGGAACAATTAAAGGTGTGCACTATAAGACTAAAGATGGCCAAGAGTTTGCAGCTTATGCTCCTCTTACCATCGTTTGTGATGGGTGTTTTTCAAACTTGCGTCGTACTCTTTGCAATCCTAAGGTAGACGTTCCCTCTTGTTTTGTTGGTTTGGTTCTGGAGAACTGTGAACTTCCATATGCAAACCATGGCCATGTTGTACTAGGAGATCCTTCACCAATCTTGTTCTATCCTATAAGTAGTACTGAGATTCGCTGTCTGGTTGATGTACCTGGTCAGAAGGTTCCTTCAATTTCAAACGGTGAAATGGCCAAGTATTTGAAGACAGTGGTAGCTCCACAGCTTCCCCCCGAGCTCTATGATCCCTTCTTAGCTGCAGTGGACAAAGGCAACATGAGGACAATGCCAAACAGAAGCATGCCAGCAGCTCCTTATCATACTCCTGGAGCCCTTCTGATGGGAGATGCATTCAACATGCGCCATCCTCTAACAGGGGGAGGAATGACTGTGGCATTGTCTGATATAGTCGTGCTCCGGAATCTTCTCAAGCCTTTGCGTGACCTAAATGATGCATCCACACTTGGCAAATATCTCGAGTCCTTTTATACCTTGCGGAAGCCCGTGGCATCCACCATAAATACGTTGGCAGGAGCACTTTACAAGGTTTTTAGTGCATCTACTGATCAGGCGAGGAGTGAAATGCGCCAAGCATGCTTTGATTATCTGAGTCTTGGAGGTGTATTCTCGGAAGGACCAATATCTTTACTTTCAGGATTGAACCCTCGTCCCTTAAGCTTGGTTCTCCATTTCTTTGCTGTCGCAATATACGGTGTGGGCCGCTTGTTGATTCCATTTCCCTCGCCCAATCGGGTTTGGATCGGTGCACGCTTAATATCTGGTGCTTCGGGAATCATCTTCCCCATAATAAAGGCAGAAGGATTTCGCCAGATGTTCTTTCCTGTGACAATCCCAGCTTATTACAGAACTCCTCCGTCTAAACAAGAGTGA 1590 0.4748 MADQYALGWIFCSVLGLVALYHLALPRKRNPIVSPGAPPQTQCMKSITTAGEECRSVSHDREVDVIIVGAGVAGSALAHTLGKDGRQVHVIERDLSEPDRIVGELLQPGGYLKLIELGLEDCVREIDAQQVFGYALYKDGKHTRLPYPLEKFHSDVSGRSFHNGRFIQRMREKAASLPNVRLTQGTVTSLLEENGTIKGVHYKTKDGQEFAAYAPLTIVCDGCFSNLRRTLCNPKVDVPSCFVGLVLENCELPYANHGHVVLGDPSPILFYPISSTEIRCLVDVPGQKVPSISNGEMAKYLKTVVAPQLPPELYDPFLAAVDKGNMRTMPNRSMPAAPYHTPGALLMGDAFNMRHPLTGGGMTVALSDIVVLRNLLKPLRDLNDASTLGKYLESFYTLRKPVASTINTLAGALYKVFSASTDQARSEMRQACFDYLSLGGVFSEGPISLLSGLNPRPLSLVLHFFAVAIYGVGRLLIPFPSPNRVWIGARLISGASGIIFPIIKAEGFRQMFFPVTIPAYYRTPPSKQE 529
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere05g1741 529 Pfam NAD(P)-binding Rossmann-like domain 67 93 - -
Dere05g1741 529 Gene3D - 52 419 IPR036188 -
Dere05g1741 529 PANTHER SQUALENE MONOOXYGENASE 9 525 IPR040125 GO:0004506|GO:0016126
Dere05g1741 529 FunFam Squalene monooxygenase 2 57 437 - -
Dere05g1741 529 PRINTS Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 356 372 - -
Dere05g1741 529 PRINTS Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 341 356 - -
Dere05g1741 529 PRINTS Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 213 228 - -
Dere05g1741 529 PRINTS Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 64 86 - -
Dere05g1741 529 Pfam Squalene epoxidase 214 486 IPR013698 GO:0004506|GO:0016020|GO:0050660
Dere05g1741 529 SUPERFAMILY FAD/NAD(P)-binding domain 63 437 IPR036188 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere05g1741 Dere-ChrDere05 27140078 27144079 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere05g1741 17 529 Miscellaneous Gene Families AT1G58440 75.922 0.0 806
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere05g1741 05 27140078 27144079 Dere05g1741 05 27140078 27144079 ECH