Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere05g1715 ATGGGTGAACTTTATAAAATCAGTTCAATAGATTGGAGGCCTTCTCCAGTAGTATCTTTAGCCACCAGCGTCGATGGTTTGCAAGTCGCTGCAGCTCGCGAAGATGGCTCCTTGGAGCTCTGGCTTGTCTCCCCCGGCTCCGTTGGTTGGCACTGTCAGTTGACTATTCATGGAGACCCTAGTTCAAGAGTATCCTCACTTATTTGGTGTCCTGGTGGTTCAAGTGGTACGCCATTTGGTCGGTTATTCTCATCTAACATAGATGGGTCGGTTTCTAAGTGGGATCTTTTCCACTTGACGCAGAAGACTGTGCTCGATTCAGTTGGTGTCTCAATCTGGCAAATGGCATTGGCGCCATCTAACAGTAACTTTATTAATACAGAAGCAGAGCCTGGTATATTGGAGAATGGATATTTGAGCTATGATATTGGAAATGATCGTGATGAACATGAAACCAGTGAAAGCGAAGAGGATTCTGACCCATCTAACTCTCTTAAAAACTCTCTTCTTGAGTGTCCACGTGTAGCAATTGGTTGTGATGATGGATGCGTGCGAATATATGCCATCTCGGGCTCAGATGAGTTTGTGTATACAAAATCCTTGCCTCGGGTCAGTGGACGAGTTTTAAGTGTGACTTGGAGTACAGATGCTAAGTTCGTGTATTCAGGAAGTAGTGATGGCTTAATACGATGCTGGGATGCTGCATTGGGTCATGAAATCTATAGAATTACAGCTGGACATGGAGGTTTGGGCAGTGGTCACGAACTTTGTATATGGTCGTTACTGTCCTTAAGGTCTGGGACACTGGTTAGTGCAGACAGCAGTGGCAGCGTCCAATTTTGGGATGGTCAACATGGAACTCTTTTACAAGCACATTCATTGCACAAGGGAGATGTATATTCTCTGGCTGCAGCGCCAAGTCATAATAGGGTGTTCTCTGCTGGTTCTGATGGCAAGGTTATCCTTTATAAGCTCTCCAGTGAGTCAGTATCATCTGACAGTGTTGAGTCATCAGCAATGATGAAGAGATGGATTTATGTTGATTATGTGAGGGCTCATACACATGATGTCAGGGCCTTGACTGTGGCAGTACCAATTTGTCGAGAAGATCCCTTGCCAGATGAGAAGATTAAAAGAACTCGTCGAGAAGAAAAACCTATTGATTTTAGTTACCGTAAATGGGCCCATTTGGGGGTTCCCATGCTGATATCAGCAGGTGATGACACAAAACTCTTTGCATATGCTGTGAAGGAGTTTACCAAGTTCTCTCCACATGATATCTGCCCTGCACCACAGAGAACAGCCATTCAACTAGTGCTTAAAACTGCATTCAATCAATCAGCAATGCTTTTAGTCCAGTCTTCGCACTGTTTAGATGTTCTTTCTGTACAATTGAAAAAGGGTGTCTTCCCTGATATTACACGTCGTACAGCTGGAGGCTTTGCAAAAACTGATCTGCTTGCTCAAGTTAAGAGTAAGTCATCTCGGAAGATAATTTGCAGCACAATTGCTAATTCAGGGGTGCTATTTGCATACTCTGATATTGTGAAACCTAGTCTATTTGAATTGAAGAGGTCTGAGGTTGGGAAGAGCACATGGAGTGTTAGTAAAAGGCTACTACCTAATAGACTACCGTTTGCTCATTCCATGGTTTTTACTCATGATTCCTCCCGGTTGATAGTAGCTGGGCATGATAGAAGGATATATGTTGTGGACGTGGGTAGTTCAAAATTAGTGCATGTTTTTACCCCCTCCCGCGAGATGCAAGATGAAGAATTACCTCCAACTGAACCTCCCATAACAAGATTGTTTACCAGTTCAGATGGGCAGTGGCTAGCGGCCGTGAATTGCATTGGAGATGTATACATATTCAATCTGGAGATACTAAGGCAGCACTGGTTCATCTCAAGATTAGATGGTGCCTCTGTTACAGCTGGTGGATTTCCTCCCCAGAACAACAATATTCTTATAGTTACTACTTCCTCAAATCAAGTGTATGCATTGGATGTTGAGGCCAAGCAGTTGGGAGAATGGTCAATGCGGCATACATTTGTTCTTCCAAAGAGATTCCAAGAATTTCCTGGTGAAGTTATTGGGCTCTCATTCCCTCCTTCCTCAACTTCAACTTCGGTTGTTGTTTACAGTGCCAGGGCAATGTGCTTGATCGACTTTGGTTTGCCAGTGGAGCAAGATGATGGTGATCTATTAAATGCTCAAGATTCGTTGGCGAAGAATCTACAGAATTCTCTGAAGAGGAAACTTAAACATAGAAAGAATTTTGAAATTTTGCAATTCAGGGATCCTGTTTTATTTTTAGCACATCTTTCGAAAAATTCCTTCTTATTAATAGACAAGCCCTGGTTAGAAGTGGTCAAAAGTTTAGAAGCCCCGCCAGTTCACAGACATATTTTTGGGACATAA 2421 0.4308 MGELYKISSIDWRPSPVVSLATSVDGLQVAAAREDGSLELWLVSPGSVGWHCQLTIHGDPSSRVSSLIWCPGGSSGTPFGRLFSSNIDGSVSKWDLFHLTQKTVLDSVGVSIWQMALAPSNSNFINTEAEPGILENGYLSYDIGNDRDEHETSESEEDSDPSNSLKNSLLECPRVAIGCDDGCVRIYAISGSDEFVYTKSLPRVSGRVLSVTWSTDAKFVYSGSSDGLIRCWDAALGHEIYRITAGHGGLGSGHELCIWSLLSLRSGTLVSADSSGSVQFWDGQHGTLLQAHSLHKGDVYSLAAAPSHNRVFSAGSDGKVILYKLSSESVSSDSVESSAMMKRWIYVDYVRAHTHDVRALTVAVPICREDPLPDEKIKRTRREEKPIDFSYRKWAHLGVPMLISAGDDTKLFAYAVKEFTKFSPHDICPAPQRTAIQLVLKTAFNQSAMLLVQSSHCLDVLSVQLKKGVFPDITRRTAGGFAKTDLLAQVKSKSSRKIICSTIANSGVLFAYSDIVKPSLFELKRSEVGKSTWSVSKRLLPNRLPFAHSMVFTHDSSRLIVAGHDRRIYVVDVGSSKLVHVFTPSREMQDEELPPTEPPITRLFTSSDGQWLAAVNCIGDVYIFNLEILRQHWFISRLDGASVTAGGFPPQNNNILIVTTSSNQVYALDVEAKQLGEWSMRHTFVLPKRFQEFPGEVIGLSFPPSSTSTSVVVYSARAMCLIDFGLPVEQDDGDLLNAQDSLAKNLQNSLKRKLKHRKNFEILQFRDPVLFLAHLSKNSFLLIDKPWLEVVKSLEAPPVHRHIFGT 806
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere05g1715 806 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 201 233 - -
Dere05g1715 806 PANTHER WD REPEAT-CONTAINING PROTEIN PCN 1 806 IPR044622 GO:0010073|GO:0035266
Dere05g1715 806 ProSiteProfiles Trp-Asp (WD) repeats profile. 292 333 IPR001680 GO:0005515
Dere05g1715 806 SMART WD40_4 3 42 IPR001680 GO:0005515
Dere05g1715 806 SMART WD40_4 148 188 IPR001680 GO:0005515
Dere05g1715 806 SMART WD40_4 236 282 IPR001680 GO:0005515
Dere05g1715 806 SMART WD40_4 194 233 IPR001680 GO:0005515
Dere05g1715 806 SMART WD40_4 285 324 IPR001680 GO:0005515
Dere05g1715 806 SMART WD40_4 575 625 IPR001680 GO:0005515
Dere05g1715 806 SMART WD40_4 537 572 IPR001680 GO:0005515
Dere05g1715 806 SMART WD40_4 49 95 IPR001680 GO:0005515
Dere05g1715 806 ProSiteProfiles Trp-Asp (WD) repeats profile. 201 242 IPR001680 GO:0005515
Dere05g1715 806 Gene3D - 135 265 IPR015943 GO:0005515
Dere05g1715 806 Gene3D - 266 467 IPR015943 GO:0005515
Dere05g1715 806 SUPERFAMILY WD40 repeat-like 173 675 IPR036322 GO:0005515
Dere05g1715 806 SUPERFAMILY WD40 repeat-like 9 249 IPR036322 GO:0005515
Dere05g1715 806 Gene3D - 527 724 IPR015943 GO:0005515
Dere05g1715 806 Gene3D - 3 133 IPR015943 GO:0005515
Dere05g1715 806 MobiDBLite consensus disorder prediction 145 166 - -
Dere05g1715 806 Pfam WD domain, G-beta repeat 208 233 IPR001680 GO:0005515
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere05g1715 05 26821597 26827692 Dere05g1715 05 26821597 26827692 ECH