Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere05g1709 ATGGCCAATCTGAAAGACCCTAATCTTACAGACAACGAAAGGGGTTCGCTTTCCTTCACTAATTTCCCCGAAGATGTTCAGCTATGTATTCTCTCCTTCCTCACACCATCTGAAATTGTCACCTTCGCCTGCACATCGAAGCGATTCGGCTCACTCTGTACCAACGATAGTAAACTCTGGTTTACCATGTGCGACAGGAAGTGGGGTTCGAAGACCCAGATCGCGAAATGGGGCAATGGGAAAATTACCTACCGCCTTCTGTACAAAACCCTCAACGAATGGGAGAATTTAATTGGCTTTTGGCGTCGAAGCGGACCGGGAAGCATCGCTATTGCATCACCATCGCTGGTTTTCTTCGAGTGGGGCCCATCATTTCTTGCCGGTTCCAGAATTTCTCCGTCGAAAACTGGTACCTACGATGTAATAAAGTCGCCATTTTTATGGATGAGTCTTTCGCCGGAGGGACAGATTGTGAATTTTCTCGATCCCGATGGGCGAAGTGAAATGTCCGCGGAATTTGCGACTTCTGAGCAATTCGACTTGCTTGAGAATGAACTGATTCCGGTCAATGTTAGTTTTATGGGAAAAACACACTTTGTTGTGGAGGAAAATCAAAACTTCATCTATTTCAATTGTCAAGACCAAAGGAAACAAGGATTCAGGAGAAGCTCGAGTAGCACGAATTTTAGTGGAGATGATTGCTGTGTTGGAGAAGACCTGATTGGTGCCGAAAGTGGATCACCAGGAAGCTTACCGGACAGATTGATGTCAGACATTTATCAGCATTTTGCCAACAGGACAAGCCCCGGTAGTGATAAATCGAGGAAACAAAGGAGGAGGGAGAAGGAAAGGCTAGCCAGAAGGAAATGGGAGCCTGAACATTTTGTAAAGATTGTTAATTGTGCACCCACGCCATTACGCCCTTTGCAAGGCCTATGGAAGGGCATTTGTAATGACATGAGTTTGGCCTTTTATCTTGTGACCTATGATGACATTGGGGGCATTGCTTGTCGCCGTGTTGGGAATCATGCAGAACGTTTTTCCAGTTATGTCCCTGTTTTCTGGACAACAAATACTACATTTGTAGAATCTCCCTTTTCCCCAGAGGAGCAGTATTTATACGACACTCGTATTCATCTCCGACCACTTGAAGCAGACAGTGAGATTCACGAGCAGTTCCCTCTGACCGAAAATGATGTGGTAAATCGAATTCTTCACATAAGCTCGAGTTATGACTTAGTTATTCCAGACCTGGCTGAAACAATAAATCCTCGGAGTGCGGAGGGAAGGATTTGGCAGTACCAGAATGGTACTTTTGGATTTGGCTTTCTTCGGGACAATTTTATAATAGACCTGAAGCATATTGCCCATGATGATTTTAGACAGAATGTGAATAAAGGAAATTTGGTAGCATCACAAAGTAGTAGGTACTCTTGGGAGACGAATGACAGAGAGAACTACGTTAGTGGGAAAACGAAATTTGAGTGCGGCGAAGCATTTGTGAAAATCAATGAGTTTCAAGAAGTACAGAAGTACGTAGTTCTGAATCACGTTTTCCGAATCAGATGCTCGAGATCTCATTTGGGTATCAACAATCTCACAATCACTCCAAAAACAAATTATGAAGATCCACACACTTCAACTGAAAACAGAGGAATACCATATTAA 1668 0.4371 MANLKDPNLTDNERGSLSFTNFPEDVQLCILSFLTPSEIVTFACTSKRFGSLCTNDSKLWFTMCDRKWGSKTQIAKWGNGKITYRLLYKTLNEWENLIGFWRRSGPGSIAIASPSLVFFEWGPSFLAGSRISPSKTGTYDVIKSPFLWMSLSPEGQIVNFLDPDGRSEMSAEFATSEQFDLLENELIPVNVSFMGKTHFVVEENQNFIYFNCQDQRKQGFRRSSSSTNFSGDDCCVGEDLIGAESGSPGSLPDRLMSDIYQHFANRTSPGSDKSRKQRRREKERLARRKWEPEHFVKIVNCAPTPLRPLQGLWKGICNDMSLAFYLVTYDDIGGIACRRVGNHAERFSSYVPVFWTTNTTFVESPFSPEEQYLYDTRIHLRPLEADSEIHEQFPLTENDVVNRILHISSSYDLVIPDLAETINPRSAEGRIWQYQNGTFGFGFLRDNFIIDLKHIAHDDFRQNVNKGNLVASQSSRYSWETNDRENYVSGKTKFECGEAFVKINEFQEVQKYVVLNHVFRIRCSRSHLGINNLTITPKTNYEDPHTSTENRGIPY 555
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere05g1709 555 MobiDBLite consensus disorder prediction 264 285 - -
Dere05g1709 555 SMART fbox_2 22 63 IPR001810 GO:0005515
Dere05g1709 555 CDD F-box_SF 20 54 - -
Dere05g1709 555 ProSiteProfiles F-box domain profile. 16 63 IPR001810 GO:0005515
Dere05g1709 555 PANTHER F-BOX ONLY PROTEIN 48-RELATED 18 314 IPR045118 GO:0019005|GO:0031146
Dere05g1709 555 MobiDBLite consensus disorder prediction 269 285 - -
Dere05g1709 555 Gene3D - 8 96 - -
Dere05g1709 555 Pfam F-box domain 20 57 IPR001810 GO:0005515
Dere05g1709 555 SUPERFAMILY F-box domain 10 92 IPR036047 GO:0005515
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere05g1709 05 26771791 26774767 Dere05g1709 05 26771791 26774767 ECH