Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere05g1688 ATGGACCCGTCTATAGTGAAGCTTCTTGAAGATGACGAGGATGAAACAATGCATTCAGGGGCAGATGTGGAAGCATTTCAGGCTGCCTTAAATAGAGACATAGGAGGAGACACATCTACTTCTCAGCCTTCTGGTTCAGACGCAGCTTTTTCTCAAGGAAACAATAACACATTCAGTCAGTCATTACCACAGTGGCCAACTTCTAGCCATGACAATCAACCTGACCGTCAAACTCAACAAGACCCTAAAATTACACAGCAGCAAGAACAACCTTCATCTGAGATGGAGATGAAACAACATGGATCTCTTGTGGAACAGCTGCAGAATGTTGCTTCTCAGGATGTAAATCATCCTCCTTTATCACAGAAACAATCTCAAGATGAATGTCACCATGGGCAGACTGTACAAGGTTCCCTCCAAAATCCTCAAACAACTGGAATCCCAAATCCTGGAAAAGATCCAGTTCTTAATAGTGAGCCAGTCAAAACACATAATCCCAGCAATGAATCTCAATATTTCAAGTTGCAGCAGATGAGTAATCAACAGGCAACAGTAACTGAGCAGCCAAGCAGCCAACTAAATCGTAGTAAACAGGTACCATTTGGCCTGTTGCTACCTATTTTGCTTCCGCAGCTTGCCAAAGACAGAGCCATGCAACTCCAGACTTTGTTTGCTAAATTGAAGAAAGACGAAATTCCAAAAGATAATTTTGTGAGGCTTATGAAAGGAATTGTAGGGGATCAGATGCTGAGAATGGCATTATCAAGAGTGCAATCACAGACAAGATCCAACCAAGGACCTGTTGGACAGCACCCTATGAGGATGCCTACTGTTAGTTCAGGTGCAACTCAATTTAATGACCCCCATGCATTAGCACAACTGCATCAGAGAGGTATGAACACTCCTGCAGATCATTCTCATGTTACTTCTTCAACTGTCCATGTGAAGAATGAATCAGTTTATCCAACTATGGAGAACAATGCCAAAAAATCTCAGGAAATGGATGTTAAAGTAGAATCTCAAGCAGTACAACCAAGGCAGTTGCCATCTTCCAGTTCCAACTCTGTTAGTCAAGAAACAGAAAGGTCCTCAATGCACATACAAGGCCTGAATAAGCAGCAGCAACAGCATCTGCATTTTCCGTCAGCATACGGAAGTAGTGGTGCTAATTATAACCCTTATTCTGGGACAAGCAGCAGTTCAACATCTCTCAAGGCACAACCACATGATTCACATTTGAGGCAAATTCCTCATCAAAACATCGGTCCAAATCACTTAGGGGGGGCAACACAGGGTATGAATGTGATTGGCATGGCAAAACTTGATAGACAGAGTTCCGTTAACGATCCCAAGAGACTGCAGGGAGGATCTGTCACTCCAGTTGTAAATAATGCAGGACCACAGCAAACACCCAATGCTTGGCAACCTTCAACAAATAAAGAACAAAGTTCGGGCTTGTTGTCATCTGTTTCCTATGTCAAAAAGGAACCTAATGACCTATCTACTGAACAGCAACATAGACAACATTTGTCTAAATTACATGGACTGCCTTCTGTTAACACAGCTCAGATTGAACAGGGAACTAGCAATCAAGGAACTTTAAAGGATGAGTTTTCCAGAGGTCTTCCAGCATCTACAAGCATGCAACCTACAACTTCTTCTAGCTTGTTGCCGTCCAATTCTGCTTCTCCTTCAATAATTGAACCTAGTGTCCCGTTAGGCTCTCAGATTCCATCAAACCCTTCTGGTATTAATGCAAGGACCCCTCTGAAAAAGCCTTCTCTTGGCCAGAAGAAACCACTTGAAGCACATGGTTCCTCACCACTGCCTCCAAGTAAAAAACAGAAGGTGTCTGGAGCTTCTCTGGAGCAAAGCATTGAACAGCTTAACGATGTTACAGCTGTTAGTGGAGTTGATCTTAGGGAGGAGGAAGAACAGTTATTTTCCGGGCCCAAAGAGGACAGTCGAATTTCAGAAGCATCTAGGAGAGTTGTGCAAGAAGAAGAAGAAAGGCTGATTCTGCAGAAAGCTCCATTGCAGAACAAATTGATTGATATTATGGCCAAGTGTGGTTTGAAGGGTGTTGGCAATGATGTAGAGAAATGCTTGTCTCTGTGTGTGGAGGAAAGAATGCGTGGACTGATTAGTAACCTAATCAGACTCTCAAAACAGCGAGTTGATTTTGAGAAGACCAGACACCGGGTTGTTGTCACCTCAGATGTTCGGCAACAAATCATGACAATAAATAAGAAAGCAAGGGAAGAGTGGGAGAAGAAACAGGCTGAAGCTGAGAAGCTTCGTAAACTTAACGAAGCTGAGAGTAATCCTGGAGCTGATGGTGACAAGGATAAGGATGAAAGTCGTAATAAATCAATGAAGGCAAATAAAGAAGAGGATGATAAGATGAGGACAAATGCTGCAAATGTTGCTGCTCGAGCTGCTGTTGGGGGAGATGACATGCTGTCCAAATGGCAACTTATGGCTGAGCAAGCCCGTCAAAAACGTGAAGGGGTGATGGACACATCATCTAGTTCTCAACCAGCTAAAGATGTGTGCCGCAAGTCTTCATCTTCATCTGGAAGAAGTACAAAGGATAATCAAGACGGGGAGAAAAGAGTTTCAGCTTCGCATGCAAGTTCTGGGGCTGCTAGAAAACTTGGGAGAAATCAGGCCATTGCACATCAAACTCGGGTAGTTCGTAGTATTTCTGTTAAGGACGTAATTGCAGCCCTGGAAAGGGAGCCCCAGATGTCCAAATCACCACTGATATATCGCTTGTACGAGAAAATTCATTCCGAGGCCCCAGCTGAATAA 2814 0.4346 MDPSIVKLLEDDEDETMHSGADVEAFQAALNRDIGGDTSTSQPSGSDAAFSQGNNNTFSQSLPQWPTSSHDNQPDRQTQQDPKITQQQEQPSSEMEMKQHGSLVEQLQNVASQDVNHPPLSQKQSQDECHHGQTVQGSLQNPQTTGIPNPGKDPVLNSEPVKTHNPSNESQYFKLQQMSNQQATVTEQPSSQLNRSKQVPFGLLLPILLPQLAKDRAMQLQTLFAKLKKDEIPKDNFVRLMKGIVGDQMLRMALSRVQSQTRSNQGPVGQHPMRMPTVSSGATQFNDPHALAQLHQRGMNTPADHSHVTSSTVHVKNESVYPTMENNAKKSQEMDVKVESQAVQPRQLPSSSSNSVSQETERSSMHIQGLNKQQQQHLHFPSAYGSSGANYNPYSGTSSSSTSLKAQPHDSHLRQIPHQNIGPNHLGGATQGMNVIGMAKLDRQSSVNDPKRLQGGSVTPVVNNAGPQQTPNAWQPSTNKEQSSGLLSSVSYVKKEPNDLSTEQQHRQHLSKLHGLPSVNTAQIEQGTSNQGTLKDEFSRGLPASTSMQPTTSSSLLPSNSASPSIIEPSVPLGSQIPSNPSGINARTPLKKPSLGQKKPLEAHGSSPLPPSKKQKVSGASLEQSIEQLNDVTAVSGVDLREEEEQLFSGPKEDSRISEASRRVVQEEEERLILQKAPLQNKLIDIMAKCGLKGVGNDVEKCLSLCVEERMRGLISNLIRLSKQRVDFEKTRHRVVVTSDVRQQIMTINKKAREEWEKKQAEAEKLRKLNEAESNPGADGDKDKDESRNKSMKANKEEDDKMRTNAANVAARAAVGGDDMLSKWQLMAEQARQKREGVMDTSSSSQPAKDVCRKSSSSSGRSTKDNQDGEKRVSASHASSGAARKLGRNQAIAHQTRVVRSISVKDVIAALEREPQMSKSPLIYRLYEKIHSEAPAE 937
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere05g1688 937 MobiDBLite consensus disorder prediction 831 895 - -
Dere05g1688 937 MobiDBLite consensus disorder prediction 837 863 - -
Dere05g1688 937 MobiDBLite consensus disorder prediction 300 329 - -
Dere05g1688 937 Coils Coil 657 677 - -
Dere05g1688 937 MobiDBLite consensus disorder prediction 343 418 - -
Dere05g1688 937 MobiDBLite consensus disorder prediction 115 167 - -
Dere05g1688 937 ProSiteProfiles RST domain profile. 192 263 IPR022003 -
Dere05g1688 937 MobiDBLite consensus disorder prediction 10 102 - -
Dere05g1688 937 Coils Coil 749 773 - -
Dere05g1688 937 MobiDBLite consensus disorder prediction 33 102 - -
Dere05g1688 937 Pfam Transcription initiation factor TFIID component TAF4 family 629 926 IPR007900 GO:0005669|GO:0006352
Dere05g1688 937 MobiDBLite consensus disorder prediction 448 498 - -
Dere05g1688 937 MobiDBLite consensus disorder prediction 514 587 - -
Dere05g1688 937 MobiDBLite consensus disorder prediction 444 622 - -
Dere05g1688 937 CDD TAF4 624 925 IPR007900 GO:0005669|GO:0006352
Dere05g1688 937 PANTHER TRANSCRIPTION INITIATION FACTOR TFIID SUBUNIT 4 14 931 IPR045144 GO:0005669|GO:0006352
Dere05g1688 937 Pfam RCD1-SRO-TAF4 (RST) plant domain 195 258 IPR022003 -
Dere05g1688 937 MobiDBLite consensus disorder prediction 767 803 - -
Dere05g1688 937 Gene3D Histone, subunit A 674 719 IPR009072 GO:0046982
Dere05g1688 937 MobiDBLite consensus disorder prediction 300 431 - -
Dere05g1688 937 FunFam Transcription initiation factor TFIID subunit 4B 672 719 - -
Dere05g1688 937 MobiDBLite consensus disorder prediction 115 151 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere05g1688 Dere-ChrDere05 26589748 26596096 Dispersed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere05g1688 05 26589748 26596096 Dere05g1688 05 26589748 26596096 ECH