Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere05g1644 ATGATCGAGCGGATAAATATTGCGGTGGTGGCAGCCATCGTCGGATGTCTTTCAACGCTTTTGTTGGTTTTAATTTATCGTTGGTGTTATCACAGAAAGGGTAGAAATTTCGTAGAGCCGTCGAGCCTCACCCGAATGGCGAGCCTCCAAGCAGCCACTGATAGACTTCATCAACAACACCAGCCTAATTTTCATCATCAATTTGATCAGGGAGGTAAGAACAAGGGCAATTATTTTGTGTTTCGTCGTGGGATCTCTGGAAGGCCTTTGTTCTGTTGGGCTGATCATCCCTATATCGCGGCTGATGCTGTAGAAAATGGATGGTCTCGATTTGCTTTCATGGGCTACAAGAGCCACATGTCGTCTCCTTCAAAAAGATCAGCCCTTTTAGGAGTATGTGCAGCAGGTGATCATGGAAGAGAAACAGAGGCCGAGGTTACCTGGGAAGTGTGTCAGGGATCCGCTGATTTTATGCAGAAGATAAGATTAAATCCTGGGCTTAAAAGGGTTCCTCCAAGCAATCCTTCTATGAATGTTGTTTCGGTGATTAGGACGGCTCTACCTCTGCCTGGCCCTCCTCTGGGAAACTACTCATTCCCACAAGAGGCCTATTTTGAAATTACCGTTCTGTATTCTCGTGGGGATGATTATGAATCTGTTGGGAAGAATAGAGAAGGTGAGAAGGCAAAACTCATTCAGGATAATTTGAATGCCAAAGGGAAATCGGAGGCTTTGGTCCATGTTACCAGTAGTCATAAAATAAACAATGTTGAAGAAGTCAAACTTGACGGTAGAAAAAGTGAATCTGTGATGTTCTCATTGGGGTTAACAGCAGGAGGATCTGTCCCTTTGAGAGTTCCGGGCAGCTATCCTGGGAGCATCGGCTTCAACTCCAACGGTTCTGTCTTTCTTGATGGAATGAAGCTTGTATTCGAGTCCGATAAGGAAGAATGGGTAGGAAGTGATAAAGTAATAGGATGTGGGTTTGATCCGAGGCAGAAGAAAGTTTTCTTCACATTAGACTCAGAGTTGGTGCATGTAGTTCACAGCCAGTCAGAGGAATTTGGGACACCACTCTATCCAACATTAGCTGCAAATATTGACATTCTAGTATTAGTAAATTTTGGACAAAGTGCGTTCAAGTATGCTCCTGCGAATGCACAGAGAACACCAAATCCATGCTTTATAGCCCCTCTTGTAAATTCCCCTGCTAATACCCTGGGCTACGAAGACAGCAAGGAGCTCTTTTCAATGGGAAGAATTGATTCTCAGTGGCTGAATCGTTCTGCAACCAAAGGCAGCCACAATAATGGGACTAATACTCGAGTGGTAGATTTTGATGAGGAGTCCGAGGCTGATCTATTTGAAATCGTCTTGGATGGTTCTGAAAAACCTCCCAACTCAGCTTCGTAG 1413 0.4452 MIERINIAVVAAIVGCLSTLLLVLIYRWCYHRKGRNFVEPSSLTRMASLQAATDRLHQQHQPNFHHQFDQGGKNKGNYFVFRRGISGRPLFCWADHPYIAADAVENGWSRFAFMGYKSHMSSPSKRSALLGVCAAGDHGRETEAEVTWEVCQGSADFMQKIRLNPGLKRVPPSNPSMNVVSVIRTALPLPGPPLGNYSFPQEAYFEITVLYSRGDDYESVGKNREGEKAKLIQDNLNAKGKSEALVHVTSSHKINNVEEVKLDGRKSESVMFSLGLTAGGSVPLRVPGSYPGSIGFNSNGSVFLDGMKLVFESDKEEWVGSDKVIGCGFDPRQKKVFFTLDSELVHVVHSQSEEFGTPLYPTLAANIDILVLVNFGQSAFKYAPANAQRTPNPCFIAPLVNSPANTLGYEDSKELFSMGRIDSQWLNRSATKGSHNNGTNTRVVDFDEESEADLFEIVLDGSEKPPNSAS 470
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere05g1644 470 PANTHER IMMUNOGLOBULIN SUPERFAMILY MEMBER 5 87 459 IPR043364 GO:0098609
Dere05g1644 470 CDD SPRY_RanBP_like 259 376 IPR044736 -
Dere05g1644 470 Gene3D - 174 390 IPR043136 -
Dere05g1644 470 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 16 - -
Dere05g1644 470 SUPERFAMILY Concanavalin A-like lectins/glucanases 274 382 IPR013320 -
Dere05g1644 470 ProSiteProfiles B30.2/SPRY domain profile. 176 380 IPR001870 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere05g1644 Dere-ChrDere05 26181059 26182986 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere05g1644 05 26181059 26182986 Dere05g1644 05 26181059 26182986 ECH