Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere05g1621 ATGGCTTCCAAGCAACCATTTGATGGCAATTATCTGTTGCTGAAGCCAGAAGAAGCAAGTGTGGTGGATCTAGTTCGTCTCCTCTTTTCGTCTAAATTAGAAAACAGAAGGTTCATCGAGTGCCCAGAAAAGCTCGAGTACCAGGAATTTCGCCGTCGATGGATCCTCTTCATCTCCGTCGTGGCTCAGATGGCCCTCCTAACCTCCAAAAAGTCCCTCTATCAAATAGGACACATAGTGGAGAAGTGGCTCAATCTTCTATCGAGCAATGGAGGCTTCATAAGGCTTTCGTTCAACATTCTCAGAGGAAAAATGGTACGATCACCGGAGAGAACATCGGCGAATTTCACATCGGTGGTGGGAAGCCTTGACCCGCGAGTGGAGTTAGACAAGAGTATTAAACACGAGGATGCAAAGTATAAAGGATTGCTATCTGTGATGGCCTCTAAATTGTCCTACGAGAACGAAAAGTTCGCTGAAACTGCTGTCACAAATCATTGGGATATGCATTTCTTGGGGTTACACAGCTTCTGGAACGATGTGGACATCTCATGGTATGAGTTACCCAATGTGGGCAAGATCCATGGGGGGTTCATGAAAGCTTTGGGCCTACAGAAAAATGGTGGGTGGCCCAAGGAGATAGAAGAAGCCAGTGAGGCCCAACATGAGTTTGCTTACTACGTAATCAGAAAGAAGCTGAAAAAGATGCTGCTGGAAAACGAGAACGCAAAGTTCATACTGACAGGCCACAGCTTGGGAGGAGCTTTGGCTATTCTATTTGCAGCTGTTCTTGCACTGCATGAAGAGGCATGGTTGCTGGACAAGTTAGAGGGGGTTTATACGTTTGGACAGCCAAGAGTAGGGGACGAACAATTTGGTGAGTTCATGAAGGACAAGTTGAAGAAGTACGATGTAAAGTACATGAGGTATGTTTACAGCAACGACATGGTGCCTAGGATCCCTTACGATGACAAAACCCTCTTGTTTAAGCACTTTGGTCCTTGCCTCTACTTCAATAGCTTGTACCAAGGGCAGGTTCTAGAGGAGGAGCCAAACAAGAATTACTTCTCCTTGCTGTGGGCTATACCAAAGAATTTAAATGCGGCTTGGGAGCTAATAAGGAGTTTTATTATCCCATTCGTTAAAGGAGAGGACTATAAAGAAGTTTGGTTCATGAAACTACTGAGGCTGGTTGGATTGATAGTTCCTGGATTATCAGGTCATCTTCCTCATGATTACGTGAATCTTGCTCGATTGGGGACATTACCTGCATCTCTGAAACTTCAAAATCAGCAAGATTCCAAAGCTGACTAA 1314 0.449 MASKQPFDGNYLLLKPEEASVVDLVRLLFSSKLENRRFIECPEKLEYQEFRRRWILFISVVAQMALLTSKKSLYQIGHIVEKWLNLLSSNGGFIRLSFNILRGKMVRSPERTSANFTSVVGSLDPRVELDKSIKHEDAKYKGLLSVMASKLSYENEKFAETAVTNHWDMHFLGLHSFWNDVDISWYELPNVGKIHGGFMKALGLQKNGGWPKEIEEASEAQHEFAYYVIRKKLKKMLLENENAKFILTGHSLGGALAILFAAVLALHEEAWLLDKLEGVYTFGQPRVGDEQFGEFMKDKLKKYDVKYMRYVYSNDMVPRIPYDDKTLLFKHFGPCLYFNSLYQGQVLEEEPNKNYFSLLWAIPKNLNAAWELIRSFIIPFVKGEDYKEVWFMKLLRLVGLIVPGLSGHLPHDYVNLARLGTLPASLKLQNQQDSKAD 437
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere05g1621 437 CDD Lipase_3 179 339 - -
Dere05g1621 437 PANTHER ALPHA/BETA-HYDROLASES SUPERFAMILY PROTEIN 180 428 IPR044819 GO:0004806|GO:0006629
Dere05g1621 437 Gene3D alpha/beta hydrolase 172 369 IPR029058 -
Dere05g1621 437 Pfam Lipase (class 3) 177 324 IPR002921 GO:0006629
Dere05g1621 437 SUPERFAMILY alpha/beta-Hydrolases 172 356 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere05g1621 Dere-ChrDere05 25924404 25927826 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere05g1621 10 426 Acyl Lipid Metabolism Gene Families AT1G56630 50.951 4.10e-161 462
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere05g1621 05 25924404 25927826 Dere05g1621 05 25924404 25927826 ECH