Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere05g1600 ATGACACTTCTTTGGCACTCTGAGCTGCTTCTTTGTATGGAGGATGCCAAAGAGAAGCCATCCCTCTCTGAATCGTCTTCAAAAAGTGCTGAACGGATATCACTGGCAGATACCCCTGAAGAAAATAGTGATGTAATAAACCCTACAGATAATCATTCTTACACTGAAACTCCAATCAACTTAATCAGTAATGGAAAGGGGGAATCTGGGACTCATTTGCCAGTGACTGAATTCTCCACGTTAGCAACATTACAAAATGCTTCTGATGGTCAAACTGTGGGACATGATGAAATTCTTCCTGTGGATGATTCTGGGTCAACATCAATCAGTGATGGAAAACGGGAATCTGGGACTCATGTGTCAGTGACTGAAGTCTCTAAATTAGCTGTGCAACCAGATGCTTATGATGGTCGGACTGTAGGACAAGATGAAATTCTTCCTGTAATTGATTCAGCTTCAACCTCAATCAATAATGGAAAAGAGGAATCTGGGACTAGTTTGCCAGTGACTGAAGTCTCCAAATTAGTAACACCACCAGATGTTTCTGATGGTCAAACTGCAGGAGAAGATGAAATTATTCCTATAGATCATTCGGCTTCAGCCACAATCAGTAATGGAAAAGAGGAATCTGGGACTCATTTGCCAGTTACTGAACTCTCTGAATTGGTGGTGCCACGTGATGCTTCTGATGGTCAAACAGTAGGGCAGGATGAAATTCTTCCTTTAGATGGTTCAGCTTCAACCTCAAATGGTGATATGGTTGGCATGACAGAAACAAGCAACGAGGGAACAGTAATGGGAAATTCTAAACCAGATCCTGTAGAAAACATTTCTGACAGGCATCAATCCCAAGATGATTGTACAAATGTCACTCTTGACACTGATGTTGATAATCATAATTCACTCTTGGCTTCTGCTCCTACTCATTCCATGCAGCTAGATGCAAAAAGAGGCCTTATTGATACAGCAGCTCCATTTGAATCTGTCAAGGAAGCTGTTTCCAAGTTTGGAGGAATTGTGGATTGGAAGGCCCATAGAATCCAGACTGTAGAGAGACGGAAGATTGTTGAACAAGAACTTGAAAAAGCATACGAGGAGATTCCTGAGCTTAGAAAACAATCAGAGGCTGCTCAAAAGGCAAAAACCCAAGTACTGAAGGAGCTGGACAGCACTAAGAGACTAATAGAAGAACTAAAACTTAACCTGGAGAGAGCACAAACAGAAGAGCATCAGGCACAACAGGACTCAGAACTTGCAAAACTCAGAGTGGAAGAGATGGAGCAGGGTATTGCAGATGAATCTAGCATTGCAGCAAAGGCACAGCTTGAGGTTGCTATTGCTAGGCATACGGCTGCTGTTTCAGACCTACAATCTGTCAAAGAGGAGCTGGATGCTTTGCGTAAGGAATATGCTTCTTTAGTGACTGAAAAAGATGTGGCTATTAAGAAAGCTGAAGAGGCTGTAGCTGTGTCAAAGGAAGTAGAGAAGACAGTGGAAGATCTCACTATTGAGCTAATTGCCACAAAGGAGTCATTGGAGTCTGCTCATGCAGCACACTTGGAAGCAGAGGAACAAAGAATAGGAACAGTCATGGCCAGAGATCAAGATTCTCTCAATTGGGAAAAAGAACTCAAACAGGCAGAAGAGGAGCTCCAGAGGCTAAACCAGCAAGTTTTATCTGCAAAGGATCTCAAGTCTAAACTAGACACGGCCTCTGCTTTGCTGCTTGATCTGAAAGCTGAATTAGCTGCATATATGGAAACAAAATTAAAGCAGGAAGGCGATGAAGGAGGAACCTCAAAAGGGGACCTAGAGGAACCAGAGAAGAAGACACACTCTGAAATACAAGTAGCAGTAGCATCAGCCAAAAAAGAACTTGAGGAAGTAAAGCTCAACATAGAGAAAGCAACTGCTGAGGTAAATTGCTTGAAAGTGGCTGCCTCATCATTAAGATCAGAACTTGAACAAGAGAAATCTGATCTTGCCAACATTGGGCAGAGAGAGGGAATGGCCTCCATTGCAGTTGCATCTCTTGAAGGTGAACTAGACAAGACTAGATCTGAAATAGCTTTGATTCAGATGAAAGAGAAAGAAGCCAGGGATAGAATGATTGAGCTACCCAAGAAACTACAACAAGCAGCTGAAGAAGCTAATCAGGCCAACTTGCTTGCCCAAGCAGCTCATGAAGAGCTTCGGAAAGCAAAGGAGGAGGCAGAACAAGCTAAAGCTGGAACAAGTACCGTGGAAAGTAGATTACTAGCAGCTCAAAAGGAGATAGAGGCTGCCAGGGCTTCTGAAAGGTTGGCAATAGCAGCAATTAAAGCATTGCAAGAGAGCGAATCAGCTAGAAACAACAATGAAGTGGATTCAATTGCTGGTGTGACACTTTCTTTAGAAGAGTACTACGAGCTTAGTAGGCGGGCCCATGAAGCAGAAGAGCGAGCCAATGTGAGGGTTGCAGAAGCTAATTCTCAAATTCAGATAGCTAAGGAGTCTGAATTGAAAACCTTGGAAATGTTGGATGATGCTAATAAGGAGATGCTTGCCAGAAGGGAATCTTTAAAGGTGGCCATGGATAAAGCTGAGAAAGCAAAGGAAGGAAAATTAGGTGTTGAACAAGAATTAAGAAAGTGGAGGGCTGAACATGAGCAACGAAGAAAGGCTGGTGAATTTGACCAAGGAGTAGTAAACCAGAATAAAAGCCCCAGAGCTAGTTTGGAGGGTGGTAAGGAAGCAAGCAACTTTCAGCAAGGTCCCAATGCAGATAATTCTGGACATTACTTGTCAAGCCCAAATGATTATGCGCATGGAAACAGCACTGAAAATGGTTCATCCCCAGAAATCAGAGTCGGAAAGAAGAAAAAGAGGTCATTTTTCCCACGCGTTTTAATGTTCTTTTCTAGGAGAAGAGCACATACAACCAAGTCAGGGTAA 2934 0.4288 MTLLWHSELLLCMEDAKEKPSLSESSSKSAERISLADTPEENSDVINPTDNHSYTETPINLISNGKGESGTHLPVTEFSTLATLQNASDGQTVGHDEILPVDDSGSTSISDGKRESGTHVSVTEVSKLAVQPDAYDGRTVGQDEILPVIDSASTSINNGKEESGTSLPVTEVSKLVTPPDVSDGQTAGEDEIIPIDHSASATISNGKEESGTHLPVTELSELVVPRDASDGQTVGQDEILPLDGSASTSNGDMVGMTETSNEGTVMGNSKPDPVENISDRHQSQDDCTNVTLDTDVDNHNSLLASAPTHSMQLDAKRGLIDTAAPFESVKEAVSKFGGIVDWKAHRIQTVERRKIVEQELEKAYEEIPELRKQSEAAQKAKTQVLKELDSTKRLIEELKLNLERAQTEEHQAQQDSELAKLRVEEMEQGIADESSIAAKAQLEVAIARHTAAVSDLQSVKEELDALRKEYASLVTEKDVAIKKAEEAVAVSKEVEKTVEDLTIELIATKESLESAHAAHLEAEEQRIGTVMARDQDSLNWEKELKQAEEELQRLNQQVLSAKDLKSKLDTASALLLDLKAELAAYMETKLKQEGDEGGTSKGDLEEPEKKTHSEIQVAVASAKKELEEVKLNIEKATAEVNCLKVAASSLRSELEQEKSDLANIGQREGMASIAVASLEGELDKTRSEIALIQMKEKEARDRMIELPKKLQQAAEEANQANLLAQAAHEELRKAKEEAEQAKAGTSTVESRLLAAQKEIEAARASERLAIAAIKALQESESARNNNEVDSIAGVTLSLEEYYELSRRAHEAEERANVRVAEANSQIQIAKESELKTLEMLDDANKEMLARRESLKVAMDKAEKAKEGKLGVEQELRKWRAEHEQRRKAGEFDQGVVNQNKSPRASLEGGKEASNFQQGPNADNSGHYLSSPNDYAHGNSTENGSSPEIRVGKKKKRSFFPRVLMFFSRRRAHTTKSG 977
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere05g1600 977 MobiDBLite consensus disorder prediction 89 120 - -
Dere05g1600 977 Pfam Weak chloroplast movement under blue light 317 885 IPR008545 -
Dere05g1600 977 PANTHER HEAVY CHAIN, PUTATIVE, EXPRESSED-RELATED-RELATED 318 965 - -
Dere05g1600 977 Coils Coil 844 881 - -
Dere05g1600 977 Coils Coil 449 483 - -
Dere05g1600 977 MobiDBLite consensus disorder prediction 591 612 - -
Dere05g1600 977 MobiDBLite consensus disorder prediction 40 72 - -
Dere05g1600 977 MobiDBLite consensus disorder prediction 103 120 - -
Dere05g1600 977 MobiDBLite consensus disorder prediction 17 72 - -
Dere05g1600 977 MobiDBLite consensus disorder prediction 894 946 - -
Dere05g1600 977 MobiDBLite consensus disorder prediction 228 281 - -
Dere05g1600 977 MobiDBLite consensus disorder prediction 880 953 - -
Dere05g1600 977 Coils Coil 537 581 - -
Dere05g1600 977 Coils Coil 710 744 - -
Dere05g1600 977 Coils Coil 353 422 - -
Dere05g1600 977 MobiDBLite consensus disorder prediction 242 267 - -
Dere05g1600 977 Coils Coil 675 695 - -
Dere05g1600 977 Coils Coil 612 667 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere05g1600 Dere-ChrDere05 25688653 25692508 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere05g1600 05 25688653 25692508 Dere04g0256 04 2636645 2640506 CCT
Dere05g1600 05 25688653 25692508 Dere05g1600 05 25688653 25692508 ECH