Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere05g1599 ATGTTTGGCGGGTCGGGCAGAGGAAAAGCAGCTATTCTCATAATTGATTCACCACCTGAGGAATTTGAACGCGCTCCATTTGTTGGAATTGATATATATTCACCAATCCCCGTTCGAGGCACTGCTGCTAGTACCCAAGGGATGGAAAGTACGGGTCTTCAAAAGATGGTGAAGACCGCACCATCTAAAGCTTTAATTATCAGAATCAATTTGGTTTTCCTTGCCTTCTTCTTGGTTGTTTATGCAACTTTTCTTCTTCGGCCGTCTTCTTCAATCTACTTCGAGAATGCAGCCTCCCTCGTGAGGTGCTCCTTGCGTGAATGCCATCACAAGGCAGAAAAGAGCATTAAAATGAAAGCAGTGTTGGAGGAGCCTCAGGCCAATTCGCGGAGGCCAAAGGGTATTGCAAGTAAGATAGAGGTACCAAGCTTCTTTCGCGAAATGGGGAAAGGGATGAAGATTGGAATGGTGAACATGGATGAAGATGACGTGGGAGAGTGGAGGTCACAGGGAGAAATAATAAACGTTTATTTCGACAGGGTATCACAGTTCTTCAACTGGACGGATTTGTTCCCTGAATGGATAGACGAGGAGGAAGAAAGTGATGTTCCATCATGCCCTGAGATACCAATGGCAGAGTTGGAAGCATATGAAAACATGGACGTGATCGTGGCTAAACTGCCATGCAAGCATCCTGAAGAAGGGTGGGGAAGGGACGTGTTTCGATTACAAGTCCATCTAATAGTGGCAAATCTGGCTGTGAAGAAAGGGAAGAAGGATTGGAATTGGAAGACGAAGGTGGTATTCTTGAGTAAGTGTAGACCAATGCTGGAGCTGTTTCGATGTGACGACTTGGTCAGACAGGAAGGTGACTGGTGGTATTATGAGGCAGATGTTACGAGGTTGGAGCACAAAACATCGTTGCCTGTTGGATCCTGTAAGTTGGCCCTGCCCCTCTGGGAACAAGGAATTGACGAGGAGTATGACTTGTCGAAGATTCGGAAAAGCGTGGCAAGCGGAGCAAGAGTGAAACGCGAAGCCTACGCCACCGTGCTCCACTCTTCTGAATCCTATGTTTGCGGCGCAATAACCCTGGCTCAGAGCCTCCTCAAAACCAGCACAAAGCGCGACCTTGTCCTCCTCATAGACAACTCTATCTCCGTTCCCAAACGCCAGGCCCTCTTGGACGCGGGCTGGAAGATCCGAATCATCTCCCGGATCCGAAATCCCCGAGCCGAGAAGGGCACTTACAATGAGTACAACTACAGCAAGTTCCGGCTATGGCAGCTCACCGACTACGACAAGATCATCTTTATCGACTCCGATATCATCGTTCTGCGCAACCTCGACATCCTCTTCCACTTCCCCCAGATGACGGCAACTGGCAACGACCAATCCATATTCAACTCCGGCATAATGGTGATCGAACCTTCCAACTGTACCTTCCGCGTACTGATGGACCGCCGGGACGACATCGTATCGTACAACGGGGGAGACCAAGGGTTTCTGAACGAGATATTCGTGTGGTGGCACAGATTGCCGAGGAGGGTGAATTACCTGAAGAATTTCTGGGCGAATACGACGTTAGAAGCGAGCGTGAAGAATGGGCTATTCGGGGCAGATCCGCCCAGGCTTTACGCGATTCACTTTCTGGGATTGAAGCCTTGGCATTGCTATAGGGACTATGACTGTAATTGGGATGTGGAGGATCAGCGAGTTTATGCCAGTGACGTGGCACACCGGAGGTGGTGGAAGCTTTACGATGAAATGAACGAGAGGTTGCAGAATTTCTGTAGGTTGACGAAACGACGTCGGACTGAGTTGAATTGGGAAAGGAGGAAAGCTGGAAAGAAGGGATTACCAGATGGGCACTGGAAGATCAATATTACTGATCCCAGACGAGCTGGCTCTCAACTGATGGATTAG 1926 0.4907 MFGGSGRGKAAILIIDSPPEEFERAPFVGIDIYSPIPVRGTAASTQGMESTGLQKMVKTAPSKALIIRINLVFLAFFLVVYATFLLRPSSSIYFENAASLVRCSLRECHHKAEKSIKMKAVLEEPQANSRRPKGIASKIEVPSFFREMGKGMKIGMVNMDEDDVGEWRSQGEIINVYFDRVSQFFNWTDLFPEWIDEEEESDVPSCPEIPMAELEAYENMDVIVAKLPCKHPEEGWGRDVFRLQVHLIVANLAVKKGKKDWNWKTKVVFLSKCRPMLELFRCDDLVRQEGDWWYYEADVTRLEHKTSLPVGSCKLALPLWEQGIDEEYDLSKIRKSVASGARVKREAYATVLHSSESYVCGAITLAQSLLKTSTKRDLVLLIDNSISVPKRQALLDAGWKIRIISRIRNPRAEKGTYNEYNYSKFRLWQLTDYDKIIFIDSDIIVLRNLDILFHFPQMTATGNDQSIFNSGIMVIEPSNCTFRVLMDRRDDIVSYNGGDQGFLNEIFVWWHRLPRRVNYLKNFWANTTLEASVKNGLFGADPPRLYAIHFLGLKPWHCYRDYDCNWDVEDQRVYASDVAHRRWWKLYDEMNERLQNFCRLTKRRRTELNWERRKAGKKGLPDGHWKINITDPRRAGSQLMD 641
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere05g1599 641 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 343 594 IPR029044 -
Dere05g1599 641 FunFam Hexosyltransferase 343 594 - -
Dere05g1599 641 SUPERFAMILY Nucleotide-diphospho-sugar transferases 347 596 IPR029044 -
Dere05g1599 641 PANTHER GLYCOGENIN SUBFAMILY MEMBER 236 635 - -
Dere05g1599 641 Pfam Glycosyl transferase family 8 351 557 IPR002495 GO:0016757
Dere05g1599 641 Coils Coil 640 641 - -
Dere05g1599 641 CDD GT8_Glycogenin 346 590 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere05g1599 Dere-ChrDere05 25677260 25681446 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere05g1599 118 640 Glycosyltransferase AT4G33330 66.038 0.0 738
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere05g1599 05 25677260 25681446 Dere05g1599 05 25677260 25681446 ECH