Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere05g1395 ATGGAGCTCTGTAGTGGAAGCTTCCGAACTATCCTCCATTACATCCCATCTCCACCTCGTCTCTCTTTACTCTGTTCAAGCTCTGCTTCTCTAAAAAATTCTGTTCTTTATTCTAAGCCTAGAACCTCCTATTCTTTGAAGCATTCATCATTCACCCCTGGAATTCAACTCCTTCAACCCTCCTTGCATCATCAGCGTTCGTGTCGCCTTACAGTTTCAGCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCCGTCGCTCTTGGCACTGAAAATGACCGGCTTCCCGCCGATTTGAATGTCACCGAGACTGAAGAACCTAATTCCAGAGTTAAATTGCATGTTGAAGTTCCATCTTTGGTATGCAAGGATTGTTACAAAAAGGTCATTGCTGAGTTTACTAAACAAGCAAAGATCCCTGGCTTTCGCCCTGGAAAGGTTCCAGAGAGTATTCTCCTTAATTATGTCGGGAAGAAAAATATTCAGAAGGCTACAGTTGAATCTATTTTGAGGAGGACACTTTCACATGCTATGTTGACGGTTACTGGAAAGGCTTTGCAGGACTCGGTACGTATAGTAACTAAATTTTCTGAGTTGGAGGAGACATATTCATCTCTTGGGTCTCTAAGATATGATGTCATTGTTGATGTTGCACCTGAAATCAGATGGATTCCTGAGAATGCGTACAAAAATATGAAGATAGTTGTTGAATTAGACAGTGATATAGATGCTCACAGAGCATCCGAACAAGAATTAAGAAGGCGCCACAAGTCTACCGGTCCACTAAAAATTGTTACTGACAGAGGACTACAGGTTGGTGATGTTGCTGTCCTTGACATCTCAGCAACAACAATTGATCAGGATGAATCAAATATTAAAAATATTCCATCTGCTGAAACTAAAGGCTTTCATTTTGACACGGATGATGGGGACAAAGTACTACCTGGTTTCCTTGATTCTATTATTGGAATTCGTCCAGGTGAAACGAAGTCATTTCCTCTTGTATTTCCTGAAACATGGAAGCAAGAAAATCTTCGCGGCGTTCATGCTCAATTTACTGTGGAATGCAAAGAACTATTTTACAGAGATTTACCTGAGTTAAATGATTCTATTGCTGATAAGCTTCTACCTGGATGCACCACAGTGGAGCAGGTCAAAGAAATATTGTTACAGAGATTTCTAGAAGTAGAGCAGACAGCTAAAGAACAGGCTACTGATAATGCTATCCTAGATCAGCTTTCTAAGATGGTAGAGCTTGATATTCCTCAATCCTTGTTTGAGGAACAAGGTAGACAGCTTTATGGAGCCAACCTATTAGAAATTCAGGCGAAAGTAAGACTAACTGAGCAGCAGTTGGCTTCTCTATCAAGTCCAAAGGCAGTGAATGAATATCTCGAACACCAAAGAGACAATATAACAAAGTTGATAAAACAGAATCTGGCAGTGGGAGATATATATAGGCGTGAAAATTTGCAGTTTGCTACTGAGGATCTTGTCAAAGAGGTTGAGAATTCCATTGCTGAATTTAAGCGGCAAAAGCAAGAATATGATGAGGAACGGGTGAAGGATCAGGTGCAAGAGATACTAGAGGGAGCTAAGGTGCTTGAATGGTTAAGAGAACATGCAGAGATTCAACCAAAGGAGATCAGATTAATCCTCCTTGCGAATGGGTCTGTGAGGTCAGAGGAGATCAGATTGCTTATCGGCGCCAGGCTGATGCAGCCACGTCGAACGCAAGCATCGTCTGTGCAAAGGCTGTATGCGAATGGCTCTCGCTTCAGTGAATGCGGAATTACTTATAGTTTGGTTCCAACTACTCCAAATAAATCTCCAAATAGAATGTCAATGGAAGGCTTGCCGCAATCCATGGAGCCATTGGTGATTTCACTGGTAATGACTGCCTTCAAATTAGAAGATGATTAA 1926 0.4133 MELCSGSFRTILHYIPSPPRLSLLCSSSASLKNSVLYSKPRTSYSLKHSSFTPGIQLLQPSLHHQRSCRLTVSASSSSSSSSSSSSVALGTENDRLPADLNVTETEEPNSRVKLHVEVPSLVCKDCYKKVIAEFTKQAKIPGFRPGKVPESILLNYVGKKNIQKATVESILRRTLSHAMLTVTGKALQDSVRIVTKFSELEETYSSLGSLRYDVIVDVAPEIRWIPENAYKNMKIVVELDSDIDAHRASEQELRRRHKSTGPLKIVTDRGLQVGDVAVLDISATTIDQDESNIKNIPSAETKGFHFDTDDGDKVLPGFLDSIIGIRPGETKSFPLVFPETWKQENLRGVHAQFTVECKELFYRDLPELNDSIADKLLPGCTTVEQVKEILLQRFLEVEQTAKEQATDNAILDQLSKMVELDIPQSLFEEQGRQLYGANLLEIQAKVRLTEQQLASLSSPKAVNEYLEHQRDNITKLIKQNLAVGDIYRRENLQFATEDLVKEVENSIAEFKRQKQEYDEERVKDQVQEILEGAKVLEWLREHAEIQPKEIRLILLANGSVRSEEIRLLIGARLMQPRRTQASSVQRLYANGSRFSECGITYSLVPTTPNKSPNRMSMEGLPQSMEPLVISLVMTAFKLEDD 641
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere05g1395 641 SUPERFAMILY Triger factor/SurA peptide-binding domain-like 368 550 IPR027304 -
Dere05g1395 641 Gene3D - 240 545 IPR037041 GO:0006457|GO:0015031
Dere05g1395 641 FunFam Trigger factor 265 366 - -
Dere05g1395 641 FunFam Chloroplast trigger factor 341 545 - -
Dere05g1395 641 Gene3D - 98 223 IPR036611 GO:0006457|GO:0015031
Dere05g1395 641 NCBIfam trigger factor 111 539 IPR005215 GO:0015031
Dere05g1395 641 SUPERFAMILY Trigger factor ribosome-binding domain 100 237 IPR036611 GO:0006457|GO:0015031
Dere05g1395 641 PANTHER TRIGGER FACTOR CHAPERONE AND PEPTIDYL-PROLYL CIS/TRANS ISOMERASE 51 532 IPR005215 GO:0015031
Dere05g1395 641 FunFam Trigger factor 100 222 - -
Dere05g1395 641 SUPERFAMILY FKBP-like 267 369 - -
Dere05g1395 641 Pfam Bacterial trigger factor protein (TF) 101 237 IPR008881 GO:0006457|GO:0015031
Dere05g1395 641 Hamap Trigger factor [tig]. 100 546 IPR005215 GO:0015031
Dere05g1395 641 Coils Coil 500 520 - -
Dere05g1395 641 Pfam Bacterial trigger factor protein (TF) C-terminus 382 539 IPR008880 GO:0006457|GO:0015031
Dere05g1395 641 Gene3D - 259 366 IPR046357 GO:0003755
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere05g1395 05 22852630 22862188 Dere05g1395 05 22852630 22862188 ECH