Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere05g1358 ATGTTTGGTGTCGTTAGGCGAAGAGTTGCTTCTGGCAGCTCGTCTTCTTTGTTTCTAGGTCTCTCAGTGCACAAAGTTCGGCCTAGCCCATCACTTCCAAGTAGAGTTTCTTCCATTTTGGAAAAAGAGATTGTATATCTTTCTGGAGGATGTATGAATGTCCGGAATTTCTGTCACATAAGTTCAACTGGATGCAGGATCAATTTAAAGCCTATGAGGGAGGTTTATCATCAAGAGGTTGCAATGCAAACATGGAGGCGCTCCTTTTCTTCAGATAATGGAGATCTGGTTGATGTTGTCGTCCCTCCTTTGGCTGAATCTATTGCTGATGGCACTCTAGCGAATTTTTTAAAGAAACCTGGTGATAGTGTTAAAGTTGATGAACCCATTGCTCAAATTGAGACAGATAAGGTGACAATTGATGTTACCAGTCCTGAGTCAGGTGTGATTCAGAAGCTTCTAGCCAAGGAAGGGGATACTGTTGAACCAGGTAACAAGATAGCAATCATTTCAAGGTCTGCTGAAGCCACAACTCACGTTGCCCCATCTGAGGGTACATCTGAGAAACCTGCTCCGCAGCCAACCCAAAAGATTAGTGAGGAGAAGAAAGTACCTAAAGTTGAAGCTGCCCCTATCACAGAGAAGCCTATAACACCCTCTCCTCCAAAGCACTCTCCCTCTGAGCCACAGCTTCCCCCTAAAGAAAGAGAAAGACGAGTTCCCATGACAAGACTCCGGAAACGGGTTGCTACACGGTTGAAAGATTCACAAAATACCTTTGCATTGCTGACAACGTTCAATGAAGTTGACATGACTAATTTGATGAGGCTCCGTGCTGATTATAAGGATGCATTTGTTGAAAAGCATGGAGTCAAATTGGGACTGATGTCTGGGTTTGTCAAAGCTGCAGTGAACGCACTCCAGCATCAGCCAATAGTAAATGCAGTCATTGATGGGGATGATATAATATACAGAGATTATATAGATATCAGCGTAGCCGTTGGTACTTCAAAGGGCCTTGTTGTACCAGTTATTCGTGATGCTGATAAATTGAACTTTGCGGAAATAGAAAAGGTGATCAATAATTTTGCAAAGAAGGCAAATAATGGAACTTTATCAATTGATGAGATGGCTGGAGGAACTCTTACAATATCAAATGGTGGAGTTTATGGGAGCCTTTTGAGTACCCCTATAATCAACCCCCCTCAGTCTGCAATTTTGGGCATGCACTCCATTGTGACCCGTCCCATGGTTGTTGGAGGTGAAATTGTCCCAAGGCCAATGATGTATGTTGCTCTAACGTATGACCATAGATTAATTGATGGAAGAGAGGCAGTGTTCTTTTTGCGTCGCATCAAAGATGTTATTGAGGATCCTAGGAGGCTTCTGCTAGACATATAA 1401 0.4304 MFGVVRRRVASGSSSSLFLGLSVHKVRPSPSLPSRVSSILEKEIVYLSGGCMNVRNFCHISSTGCRINLKPMREVYHQEVAMQTWRRSFSSDNGDLVDVVVPPLAESIADGTLANFLKKPGDSVKVDEPIAQIETDKVTIDVTSPESGVIQKLLAKEGDTVEPGNKIAIISRSAEATTHVAPSEGTSEKPAPQPTQKISEEKKVPKVEAAPITEKPITPSPPKHSPSEPQLPPKERERRVPMTRLRKRVATRLKDSQNTFALLTTFNEVDMTNLMRLRADYKDAFVEKHGVKLGLMSGFVKAAVNALQHQPIVNAVIDGDDIIYRDYIDISVAVGTSKGLVVPVIRDADKLNFAEIEKVINNFAKKANNGTLSIDEMAGGTLTISNGGVYGSLLSTPIINPPQSAILGMHSIVTRPMVVGGEIVPRPMMYVALTYDHRLIDGREAVFFLRRIKDVIEDPRRLLLDI 466
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere05g1358 466 PANTHER DIHYDROLIPOYLLYSINE-RESIDUE SUCCINYLTRANSFERASE COMPONENT OF 2-OXOGLUTARATE DEHYDROGENASE COMPLEX, MITOCHONDRIAL-RELATED 70 465 - -
Dere05g1358 466 CDD lipoyl_domain 97 170 - -
Dere05g1358 466 Gene3D - 223 462 IPR023213 -
Dere05g1358 466 Pfam Biotin-requiring enzyme 98 170 IPR000089 -
Dere05g1358 466 Gene3D - 96 173 - -
Dere05g1358 466 MobiDBLite consensus disorder prediction 171 242 - -
Dere05g1358 466 ProSiteProfiles Biotinyl/lipoyl domain profile. 96 171 IPR000089 -
Dere05g1358 466 NCBIfam dihydrolipoyllysine-residue succinyltransferase 219 465 IPR006255 GO:0004149|GO:0006099|GO:0045252
Dere05g1358 466 MobiDBLite consensus disorder prediction 176 194 - -
Dere05g1358 466 ProSitePatterns 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 121 150 IPR003016 -
Dere05g1358 466 SUPERFAMILY Single hybrid motif 96 186 IPR011053 -
Dere05g1358 466 FunFam Dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex, mitochondrial 229 464 - -
Dere05g1358 466 Pfam 2-oxoacid dehydrogenases acyltransferase (catalytic domain) 236 464 IPR001078 GO:0016746
Dere05g1358 466 MobiDBLite consensus disorder prediction 195 209 - -
Dere05g1358 466 SUPERFAMILY CoA-dependent acyltransferases 236 465 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere05g1358 Dere-ChrDere05 22244737 22252203 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere05g1358 50 464 Acyl Lipid Metabolism Gene Families AT3G13930 29.253 3.80e-39 147
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere05g1358 05 22244737 22252203 Dere05g1358 05 22244737 22252203 ECH