Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere05g1248 ATGGCTACTTGTGTTGACGCCTCAAGGGCGGGCATAACCGAATCCGACCCACTGTCCCGGCATCCAAACAGGTGCCAGACCGACGATCATTCATGCAACTATGTAAAATTCTGCCGATCCACTTTCTCTGATCGTCCTCCCTCCGTCCCCATTTCCCAGAATCGCCCCGGCAATTTACACTCGCGAACGTTTCTGGAGAAAGATCACGATCTCTGGGAGAAGATGCAGGACGAAGCAAGGTTAGATGTGGAACAAGAGCCGATTCTGTCGACTTATTACCACACTTCGATTTTGTCTCACCAATCCCTAGAAATCGCGATTGCGAATCTTCTCTCCATCAAATTGAGCAGCCCCAGTCTTCCCAGCAGAACCCTATTCGATCTCTTCGTTTCCACCCTGTCTGAAAACGAAGAAATCATGGGAGCCGTGAAGGATGACCTGAGAGCCGTGAAAGAAAGGGACCCAGCTTGCATCAGCTACGTCCATTGCTTCTTAAACTTCAAAGGCTTCCAGGCATGCCAAGCTCACAGAATAGCTCACAAATTGTGGTCTCAGGGAAGAGGGGTGCTAGCGCTCTTGATTCAGAACAGGGTTTCTGAGGTTTTCGCAGTGGATATCCATCCAGGAGCGAAGATTGGAAGAGGGATATTGCTGGATCACGCAACGGGACTAGTGGTGGGAGAAACTGCAGTGATAGGGAACAATGTGTCAATTCTGCATAATGTGACATTGGGAGGAACTGGTAAAGCTTGTGGGGATAGACACCCAAAGATTGGTGATGGAGTGCTTATAGGTGCAGGGACTTGCATACTGGGGAACATAAAGATTGGTGATGGTGCTAAGGTTGGTGCTGGTTCGGTGGTTCTGAAGGATGTGCCTCCAAGGACTACTGCAGTAGGGAACCCAGCTAGATTGCTAGGAGGGAAGGATAACCCTGTTAGGCTGGACAAGATTCCTAGCTTTACTATGGACCATACTTCACATATTTCTGAGTGGTCTGACTATGTTATTTAG 1014 0.4892 MATCVDASRAGITESDPLSRHPNRCQTDDHSCNYVKFCRSTFSDRPPSVPISQNRPGNLHSRTFLEKDHDLWEKMQDEARLDVEQEPILSTYYHTSILSHQSLEIAIANLLSIKLSSPSLPSRTLFDLFVSTLSENEEIMGAVKDDLRAVKERDPACISYVHCFLNFKGFQACQAHRIAHKLWSQGRGVLALLIQNRVSEVFAVDIHPGAKIGRGILLDHATGLVVGETAVIGNNVSILHNVTLGGTGKACGDRHPKIGDGVLIGAGTCILGNIKIGDGAKVGAGSVVLKDVPPRTTAVGNPARLLGGKDNPVRLDKIPSFTMDHTSHISEWSDYVI 337
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere05g1248 337 NCBIfam serine O-acetyltransferase 143 304 IPR005881 GO:0005737|GO:0006535|GO:0009001
Dere05g1248 337 CDD LbH_SAT 202 302 IPR045304 -
Dere05g1248 337 PANTHER SERINE ACETYLTRANSFERASE 50 337 - -
Dere05g1248 337 SMART SATase_N_2_a 71 175 IPR010493 GO:0005737|GO:0006535|GO:0009001
Dere05g1248 337 Pfam Bacterial transferase hexapeptide (six repeats) 255 289 IPR001451 -
Dere05g1248 337 ProSitePatterns Hexapeptide-repeat containing-transferases signature. 264 292 IPR018357 GO:0016740
Dere05g1248 337 Pfam Serine acetyltransferase, N-terminal 71 175 IPR010493 GO:0005737|GO:0006535|GO:0009001
Dere05g1248 337 FunFam Serine acetyltransferase 205 331 - -
Dere05g1248 337 Gene3D serine acetyltransferase, domain 1 58 204 IPR042122 -
Dere05g1248 337 SUPERFAMILY Trimeric LpxA-like enzymes 66 307 IPR011004 -
Dere05g1248 337 Gene3D Hexapeptide repeat proteins 205 321 - -
Dere05g1248 337 MobiDBLite consensus disorder prediction 1 24 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere05g1248 Dere-ChrDere05 20214050 20215063 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere05g1248 71 325 Miscellaneous Gene Families AT2G17640 53.333 1.24e-90 272
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere05g1248 05 20214050 20215063 Dere05g1248 05 20214050 20215063 ECH