Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere05g1224 ATGGCTGGGGTTGTCGAGAATGGAACCAGTCAACCAGATTCATCAGATAAGCAGTCTAAGGTTGACATAATAGATGATGGCAAAGAGGTCAACGACAGTCCCATCGAACAAGTTAGGCTGACGGTTCCAATAACGGACGACCCTACCCAACCAGCTCTGACGTTTCGAACATGGGTCCTAGGGTTGCTGTCGTGTGTCGTTCTGGCCTTCGTGAATCAGTTCTTCAGCTACAGAACAAACCAGCTGTCTATTTCGTCTGTCTCGGCCCAGATTGTGAGCCTCCCACTTGGGAAGCTTATGGCTGCAACACTTCCCAGAAAATCAATCAGAGTCCCTCTTACCAACTGGTCCTTTTCGTTGAATCCTGGCCCTTTTACTCTGAAAGAGCACGTGCTCATCACCATCTTTGCAAGCTCGGGATCTAGTGGGGTTTATGCGATTAACATAATCACCATTGTGAAGGCCTTCTATCATAGAAGTATCCACCCATTGGCTGCTTATTTGCTCGCAATAACCACCCAGATGATTGGATATGGATGGGCTGGCGTGTTTAGAAGATTCCTCGTTGACTCCCCTTACATGTGGTGGCCTGCTAATCTTGTGCAAGTCTCTCTATTTAGGGCATTCCACGAGAGAGAAAAGAGGCCTAAGGGGGTAAACTCAAGGCTTCAATTCTTCTTCTTGGTGTTCGCATCAAGCTTTGCGTATTACATAATCCCAGGCTATCTCTTCCCATCAATCTCAGCCATATCCTTCGTCTGTTTGATCTGGAAGAAATCCGTCACAGCCCAACAAATTGGGTCGGGCATGTCTGGGCTTGGGCTTGGATCATTTGGGCTGGACTGGAACACCGTGGCGGGCTTCTTGGGCAGCCCGCTGGCCAACCCGGGCTTCGTCATCGTCAACGTCATGGTAGGGTTCTGTCTATTTCTCTATGTTGTGGTTCCCATTGCCTACTGGTCCAATGCTTATGAGGCCAAGAAGTTTCCCCTCTTTAGCTCTCACACGTTTGACAAAACTGGTGCCACATACAATGTGTCAAGGGTTTTGAATGAAGCCAGTTTTGACATTGATTTGGACAGCTACAACAATTACAGCAGGCTCTATTTGAGCGTCTTGTTTGCCTTTAACTATGGCTTGAGCTTTGCAACTCTGACTTCTACTCTTTCTCATGTTTGCCTCTTCCATGGAAAAACAATATATCAAATGTGGAAGAAGACAACGGAGCTAAAAGGCGAATTAGCTGATGTGCACACAAGAATCATGAAGAAGAACTACGAACAAGTCCCAGAGTGGTGGTTCATTTCTATTCTGGTCTTAATGAGTGGGCTTGCCTTGTTTGCTTGTGAAGGCTTCGGAAGGCAGCTCCAACTTCCATGGTGGGGAGTCCTCTTCTCCTTTGCTATTGCATTTGTATTCACCTTGCCTATTGGGGTCGTCCAAGCCACAACAAATATGCAAGCAGGCCTTAACGTGATCACTGAGTTACTTATTGGGTATATCTACCCCGGAAAGCCTCTTGCTAACGTAGCTTTCAAGACCTATGGGTACATCAGCATGTCCCAAGCCCTAGGGTTCGTCGGCGATTTCAAATTAGGGCATTACATGAAAATCCCTCCAAAATCTATGTTCGTCGTGCAGTTGGCTGGCACAGTAGTTGCTTCAATTGTGTACTTCAGCACAGCATGGTGGCTTCTGATGACTGTGGAAAACATCTGCGACCCAAGCCTATTACCAGAGGGGAGTCCATGGACGTGTCCAGGAGACGATGTGTTTTACAATGCTTCGATCATCTGGGGAGTGATAGGACCAAAGAGAATGTTCACGAAGGATGGTAACTACCCTGGGATGAACTGGTTCTTCCTCATTGGCTTGTTAGCTCCAGTACCAGTGTGGTTTCTCTCACGCAAATTCCCTAACCATAAGTGGATTTCCCTCATCAACATGCCCATAATCTTCAGTGGTGCAGGAGGCTTGCTTCCAGCAAGATCAGTGAACTATATTACTTGGGGACTAGTTGGCATCTTCTTCAACTTCTATGTGTATACTAGGTTTAAGGGATGGTGGGCTAGGCATACATATATTCTCTCTGCTGCTCTTGATGCTGGGGTTGCTTTCATGGGTGTCCTTCTCTTCTTTAGCCTACAAACTTATGACATTCTTGGCCCTGCTTGGTGGGGTCTACAAGCTAATGACCATTGTAGCTTGGCTAAATGCCCTACAGCACCTGGGATGGTGACCCCAGGATGCCCTACCTTTTGA 2262 0.4713 MAGVVENGTSQPDSSDKQSKVDIIDDGKEVNDSPIEQVRLTVPITDDPTQPALTFRTWVLGLLSCVVLAFVNQFFSYRTNQLSISSVSAQIVSLPLGKLMAATLPRKSIRVPLTNWSFSLNPGPFTLKEHVLITIFASSGSSGVYAINIITIVKAFYHRSIHPLAAYLLAITTQMIGYGWAGVFRRFLVDSPYMWWPANLVQVSLFRAFHEREKRPKGVNSRLQFFFLVFASSFAYYIIPGYLFPSISAISFVCLIWKKSVTAQQIGSGMSGLGLGSFGLDWNTVAGFLGSPLANPGFVIVNVMVGFCLFLYVVVPIAYWSNAYEAKKFPLFSSHTFDKTGATYNVSRVLNEASFDIDLDSYNNYSRLYLSVLFAFNYGLSFATLTSTLSHVCLFHGKTIYQMWKKTTELKGELADVHTRIMKKNYEQVPEWWFISILVLMSGLALFACEGFGRQLQLPWWGVLFSFAIAFVFTLPIGVVQATTNMQAGLNVITELLIGYIYPGKPLANVAFKTYGYISMSQALGFVGDFKLGHYMKIPPKSMFVVQLAGTVVASIVYFSTAWWLLMTVENICDPSLLPEGSPWTCPGDDVFYNASIIWGVIGPKRMFTKDGNYPGMNWFFLIGLLAPVPVWFLSRKFPNHKWISLINMPIIFSGAGGLLPARSVNYITWGLVGIFFNFYVYTRFKGWWARHTYILSAALDAGVAFMGVLLFFSLQTYDILGPAWWGLQANDHCSLAKCPTAPGMVTPGCPTF 753
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere05g1224 753 NCBIfam OPT family oligopeptide transporter 37 716 IPR004813 GO:0035673
Dere05g1224 753 PANTHER ISP4 LIKE PROTEIN 28 751 IPR004648 GO:0055085
Dere05g1224 753 MobiDBLite consensus disorder prediction 1 22 - -
Dere05g1224 753 Pfam OPT oligopeptide transporter protein 53 714 IPR004813 GO:0035673
Dere05g1224 753 NCBIfam small oligopeptide transporter, OPT family 31 718 IPR004648 GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere05g1224 Dere-ChrDere05 19651642 19657037 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere05g1224 11 753 Organic Solute Cotransporters AT5G55930 67.871 0.0 1061
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere05g1224 05 19651642 19657037 Dere05g1224 05 19651642 19657037 ECH