Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere05g1223 ATGAGCGGCGGGGGTGGGTCTAGGGTTCCAATCCCCAGCAACGTGAGGAAAACCATTCAAGACATTAGGGAGATCACCGGCAAGCAGCACAGCGACGATGAAGTCTACGCCGTCCTCAAGGAATGCTCTATGGATCCCAATGAGACCGCTCAGAAGCTTTTGTATTTAGTTGTAGAACTTGAGTTTTATCGTCCTCGACTTCTTTCTGTTGGTAGTAATTGGTTAAAGTTCCTATATGGCTTGAGCAGCAGGGCTTCTGGAGATTCTAGGTCAAAGCAAACTGGACAAGGGAGGGGGGGAAGGGCTGCTTCAGGGGTCTATTCTTCTAATTTTCCTGATGGTGCTGGTGGGAGGAACCTTGCTATTCATAGGGAAAATGGAGTCAAAAACATTGCTAAGAGAGGTCAAGCACCCTTTACTCGTCCAATTGTGCAGAAAACGAAAACTCTTGCGGCGTCTCAAGTCATAAGAGTTTCAGCTGTTGCCCCTAATGGTTGTGCGAATCAATCCAATGGGAGTTCTGATGGATCTGCTGGCCAAAGTTGCATATGTAGTTTTACAAGTGTCTCTAAAAGCAGTACAGCTATTGTTGACAATAGCATGCAAGAAAATGATTTACCTCAAGCTGCTGTTGCTTCATCTTCATCTACTCAGACCTCGGGTTCAATTACCAGAGATGACCAAGGAGAGTCCATATCAAGTTCTGATCAATTTCCAACTGCTTCTTCAGCATCTGTGGCTGTTGTTTCTTCCTCCTCTTTGGTCCCCATAGTGCGGCAATCTGTGCCTCTGAAATTTTGTTTTGGTGACACAAGTGATATTAATGGGGATGTTGGGAGGCACTGTATAGCTTCCGGAGTAAATCATGTCAAAGGGGACAAAGTTGATGATTCACCAGCATCAAAGAGTGAAAATTCCGAGTCCCTTTATTCAACAAGCAAAAAGATGACACCAAACAAACCTAGTGAAGTTAAAAAGAACCAGTTCTCTGAGAACTCACAGGCCTCCTCCTTTTCATCTTATAATGGTTCATTGATGTCGTCTTCCAGTTGTTCTAGCCAGCCACCATCAGTCAATGTCTCAGAGGTTTCAACTTCTGAAGTTTGTGCGCCATCATCAGCTGATTTGAAGCAATATGTTATTTTTCCAAATCATTTCCAAGTACCTGAGGCTTTTAAAAATGGTCTGACATTTGGAAGCTTTGATTCTAATTCCGGTCTGAAAGAAAGATCTAGCAATGGAACTGGTCGTGACAATAATACTTTGCCTGCCCTTGAATCTTCTCTAGGGAGTGATGACACTGCTACTTCTAGGTTTCTGGTGTGGTTGAAGCTTGTCCAACCTGGTTCTCTTCTAGTAGTACTGGAGAGTGGAGATTTTCCTTCAGAGAATGTATTAAACCTTTTTCAAGGCTCTTTGACAATCACAGGGCCACTTCTTTTGCCTGTCATTCTGGTTGAACTAAATGATTTCTCTCCTCTTGACAAAGATGTTATTTGTGCCATGGCATGCTTCCATTATCTGTTCAACCAAAGTACATCATCAATTGCAAACGGCGATCATCCTGATTATCCAGATACTCTATCTTATAGGAACGAAAAAACATCTCTGAAAGGGAATGCTATCTCTGATGCCAACTCAAAAGGTGATCAGCCGAAGCAGGAGGTATTGTTGATTCCAGGGGGTCCTCCAAATTCAACGGTTGAAAATGCTCCGAACTATGGTTTGAATCTCATGTCGACCATGTTAGGGAATCAACAATTTCAATTTGAGGGAGCTGAGCCTCAAGCCCAAGGATCGTCTCACCTCCCAAACTTTGTTGGTACAAATCCTCATGCTGTATCTAGTCCTAGTCCTACTCCTCCTATTCAGAGCTCTATACCTATGTCTTCACAATCAATTCCAATTTTCAGACCACCTTACCCTACTAACTTTTTCCCTTATGGCCATTATTACCCCCCAATTTATGTGTCGCCAGTACACCAATTTTTGAGCCACAGTGGCTTCCCTCAGCAGCCATCAGTTGGCAATTTATATCTATCGGCAGCAGCTGGGATCAAATTCCCTCTCCCTCAATTCAAGGCTGGAGCGAACACAGGGAACATGGCCCATATTGGAATTCCATCTGGATCATTTATCTCCCCTCCTGTTGGATATGCTCCTAGTCCAACGGTTAATGCAGGAAGCTCCACCAGAAATGAAGACCTTGCAGTGTCTCAGTTAAAGGAAAACCATATCTATTCAACTGGACAGCTGAGTGAAGGTTCAGCTGTGTGGATGCCCTCTCGAGGCCAAGATATATCCAGCTTGCAAGTGAATTCACTGTATAACCTTACCGCGCAGGGACAACATCTTGCCTCCTGCTCAACACAGGCGGATCGTGGTGCATTTGCTGGTAGCTATCAACCGGGGCAGACAGTAGCTTCGCATTCAACTCTGTTACAAGAGTCTCAGGCTGTGGCTGGTGCTGTTGAAACTGCAGGACCTCCTTCAGTTGCTTATCAGCAACCACAGCATGCACAGATAAATTGGAATTCCCATTATTAG 2547 0.4441 MSGGGGSRVPIPSNVRKTIQDIREITGKQHSDDEVYAVLKECSMDPNETAQKLLYLVVELEFYRPRLLSVGSNWLKFLYGLSSRASGDSRSKQTGQGRGGRAASGVYSSNFPDGAGGRNLAIHRENGVKNIAKRGQAPFTRPIVQKTKTLAASQVIRVSAVAPNGCANQSNGSSDGSAGQSCICSFTSVSKSSTAIVDNSMQENDLPQAAVASSSSTQTSGSITRDDQGESISSSDQFPTASSASVAVVSSSSLVPIVRQSVPLKFCFGDTSDINGDVGRHCIASGVNHVKGDKVDDSPASKSENSESLYSTSKKMTPNKPSEVKKNQFSENSQASSFSSYNGSLMSSSSCSSQPPSVNVSEVSTSEVCAPSSADLKQYVIFPNHFQVPEAFKNGLTFGSFDSNSGLKERSSNGTGRDNNTLPALESSLGSDDTATSRFLVWLKLVQPGSLLVVLESGDFPSENVLNLFQGSLTITGPLLLPVILVELNDFSPLDKDVICAMACFHYLFNQSTSSIANGDHPDYPDTLSYRNEKTSLKGNAISDANSKGDQPKQEVLLIPGGPPNSTVENAPNYGLNLMSTMLGNQQFQFEGAEPQAQGSSHLPNFVGTNPHAVSSPSPTPPIQSSIPMSSQSIPIFRPPYPTNFFPYGHYYPPIYVSPVHQFLSHSGFPQQPSVGNLYLSAAAGIKFPLPQFKAGANTGNMAHIGIPSGSFISPPVGYAPSPTVNAGSSTRNEDLAVSQLKENHIYSTGQLSEGSAVWMPSRGQDISSLQVNSLYNLTAQGQHLASCSTQADRGAFAGSYQPGQTVASHSTLLQESQAVAGAVETAGPPSVAYQQPQHAQINWNSHY 848
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere05g1223 848 Pfam GBF-interacting protein 1 N-terminal 11 56 IPR009719 -
Dere05g1223 848 MobiDBLite consensus disorder prediction 302 335 - -
Dere05g1223 848 MobiDBLite consensus disorder prediction 207 238 - -
Dere05g1223 848 MobiDBLite consensus disorder prediction 84 110 - -
Dere05g1223 848 SUPERFAMILY UBA-like 11 54 IPR009060 GO:0005515
Dere05g1223 848 PANTHER FLOCCULATION PROTEIN (DUF1296) 1 848 IPR044277 -
Dere05g1223 848 MobiDBLite consensus disorder prediction 407 429 - -
Dere05g1223 848 MobiDBLite consensus disorder prediction 289 335 - -
Dere05g1223 848 MobiDBLite consensus disorder prediction 84 98 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere05g1223 Dere-ChrDere05 19631794 19644660 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere05g1223 05 19631794 19644660 Dere05g1223 05 19631794 19644660 ECH