Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere05g1204 ATGAGACTCTTTTCTACTTTCGAAGCCGTCAAGCTTGGAAGAGCCACGTCACTCCAACTCAAAAGATTACATATTTTGAAGGCTGACAATGTTCCGCTGCTTCGTCACTTCATCCTTCTACCATGCACCGCCTTACTTCTCCATCTCCATCGCACATCCAACGGTCCTGATCTCTCTATTGAACGGCCTTTCCCATTAGATTCCCTGAACCTTCCCGTACGCTTCTCCGTTGGAAGGTCCTTCAAATTCTGCTTGGAGAAGATGACGGTTGGAGCTGGGATTTCTGTGGCCGATGCCAACTTGATGGTGTTGGGGAAGAAGGTGCTCTCTCAGGTTCCCGAAAATGTCGTCGTCACGCCCGCGTCTTCGGCCGGTTCTTTGCTCAATGGGGCTTTCCTTGGGGTCGTTTCTGATCAAAAGGGTAGCCGAAGAGTCTTCCCTATCGGAACATTAGAGGGGTTGCGCTTTATGTGTGTATTCCGCTTCAAAATGTGGTGGATGACGCAGAGAATGGGTACTTGCGGGCAAGATATTCCCATTGAAACACAGTTCTTGCTCGTGGAAGCACATAACAGTTCTGATATTGAGGGGGTCAACGACGGAGAAGCCGAAGAACAATCTGCCACATATGCTGTTTTCTTGCCCCTTCTGGAGGGAGATTTCAGAGCAGTTCTTCAAGGAAACGAACAAAACGAGATAGAGATATGTGTGGAAAGTGGATGTCCTACTGTTGAGGGATTTGATGGGACTCATCTGGTGTTCGTTGGAGCTGGATCAGATCCATTTGAAGTCATCTCAAATGCTGTCAAGACTGTTGAGAATCACTTGCAGACATTCTCTCATCGTGAGAGGAAGAAGATGCCAGACATCTTGAACTGGTTTGGGTGGTGTACGTGGGATGCTTTCTATACCAGAGTTGATTCAGAAGGCGTAAAGCAAGGATTGCAAAGCTTAGAGAAAGGTGGGATTCCTGCTAAATTTGTTATAATTGATGATGGATGGCAATCTGTTGCAATGGACCCTAATGGTATTGAATGGGAAGCCGATAATACTGCCAATTTTGCAAATCGTTTGACCCATATCAAAGAAAATCACAAGTTTCAGAAATATTACAAACAGGATCAGAGAGAAGAGGATCCTGTTCTGGGACTCAGTCATATAACAAAGGACATCAGAGAACAGCATTCCGTAAAGTACATTTATGTGTGGCATGCTATAACCGGATACTGGGGAGGTGTTAAACCTGGGGTTTCCGGAATGGAACACTATGAGTCAAAGATGGCTTACCCAGTATCATCTCCTGGGGTTGAATCAAATCAACCAGACGAAGCTCTAACAACCATTGCCATGAACGGGCTTGGCCTCGTGAATCCTGAGAAAGCTTTTCACTTCTATGATGAACTCCACTCGTACTTGGCATCTGCTGGTATTAACGGTGTCAAAGTTGATGTTCAAAACATCCTTGAAACTCTTGGAGCTGGCCATGGTGGTAGGGTCAAACTCGCTAGAAAATACCACCAGGCATTAGAGGCTTCAATCTCAAGGAACTTCCCTGATAATGGCATAATCAGTTGCATGAGTCACAACACAGATGGATTGTACAGTGCAAAGCGATCTGCTGTAGTTAGGGCGTCAGATGATTTTTGGCCAAGAGATCCAGCATCCCACACAATTCACATAGCATCAGTTGCTTACAACACCATCTTTCTTGGTGAGTTTATGCAGCCCGATTGGGATATGTTTCAGAGCCTGCATCCAATGGCTGAATATCATGGAGCAGCCCGAGCTATTGGAGGATGTCCTATTTATGTTAGTGACAAGCCTGGACACCATGACTTCAATCTTCTCAAGAAACTTGTACTTCCTGATGGTTCTATACTGAGGGCCAAACTCCCAGGAAGACCAACAAAAGATTGCTTATTTTCTGATCCTGCCAGAGATGGAAAGAGTCTTCTAAAAATATGGAACATGAATGACTTCTCTGGAGTTGTTGGGGTATTCAATTGTCAAGGGGCAGGGTGGTGCAAAGTTGGCAAGAAGAACCTAATTCATGATGAGAATCCAGGAACTATTACTGGTGTCATTAGGGCTAAGGACGTTGACTATTTGTCCAAGGTTGCTGATGATAAATGGAATGGAGACACCGTTATATTTTCCCATGTTAGTGGAGAGGTTGTATACCTTCCAAAGGATGCATCTATTCCTTTGACATTGAGATCCAAAGAATTTGAAGTTTTCACAGTAGTTCCTGTCCAGCAATTCGACAATGGTGTCAAATTTGCTCCTATTGGTTTGATGAATATGTTTAACTCAGGAGGAGCCATCAAGGACTTGAGTTGTGTGTCTAATGTAACTACACACATAATGATGAAAGTCCGAGGTTGTGGTTCATTTGGAGCTTATTCATCAGTTCAACCTAAGATGGTGACGGTGGATTCAGAGGAGGTGGAGTTCGGATACGAGGAAGCATCTGGATTGGTGACTATTGACTTGAGAGTACCAGATAAAGAGCTGTACCAGTGGAACATATCTATCTGCTTCTGA 2544 0.4458 MRLFSTFEAVKLGRATSLQLKRLHILKADNVPLLRHFILLPCTALLLHLHRTSNGPDLSIERPFPLDSLNLPVRFSVGRSFKFCLEKMTVGAGISVADANLMVLGKKVLSQVPENVVVTPASSAGSLLNGAFLGVVSDQKGSRRVFPIGTLEGLRFMCVFRFKMWWMTQRMGTCGQDIPIETQFLLVEAHNSSDIEGVNDGEAEEQSATYAVFLPLLEGDFRAVLQGNEQNEIEICVESGCPTVEGFDGTHLVFVGAGSDPFEVISNAVKTVENHLQTFSHRERKKMPDILNWFGWCTWDAFYTRVDSEGVKQGLQSLEKGGIPAKFVIIDDGWQSVAMDPNGIEWEADNTANFANRLTHIKENHKFQKYYKQDQREEDPVLGLSHITKDIREQHSVKYIYVWHAITGYWGGVKPGVSGMEHYESKMAYPVSSPGVESNQPDEALTTIAMNGLGLVNPEKAFHFYDELHSYLASAGINGVKVDVQNILETLGAGHGGRVKLARKYHQALEASISRNFPDNGIISCMSHNTDGLYSAKRSAVVRASDDFWPRDPASHTIHIASVAYNTIFLGEFMQPDWDMFQSLHPMAEYHGAARAIGGCPIYVSDKPGHHDFNLLKKLVLPDGSILRAKLPGRPTKDCLFSDPARDGKSLLKIWNMNDFSGVVGVFNCQGAGWCKVGKKNLIHDENPGTITGVIRAKDVDYLSKVADDKWNGDTVIFSHVSGEVVYLPKDASIPLTLRSKEFEVFTVVPVQQFDNGVKFAPIGLMNMFNSGGAIKDLSCVSNVTTHIMMKVRGCGSFGAYSSVQPKMVTVDSEEVEFGYEEASGLVTIDLRVPDKELYQWNISICF 847
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere05g1204 847 Gene3D Aldolase class I 291 617 IPR013785 -
Dere05g1204 847 FunFam Probable galactinol--sucrose galactosyltransferase 1 291 618 - -
Dere05g1204 847 SUPERFAMILY (Trans)glycosidases 288 619 IPR017853 -
Dere05g1204 847 PANTHER - 88 844 IPR008811 -
Dere05g1204 847 Pfam Raffinose synthase or seed imbibition protein Sip1 94 830 IPR008811 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere05g1204 Dere-ChrDere05 19326173 19331823 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere05g1204 88 845 Glycoside Hydrolase AT1G55740 72.105 0.0 1116
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere05g1204 05 19326173 19331823 Dere05g1204 05 19326173 19331823 ECH