Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere05g1160 ATGGTTCAGAACTCAGGGTTCTCGCTGCCACCAACCAGCATTATTGCTAGACCACCACTTCTGCCGCCATCTCTTTGCTTGAAGTTCTGCCATAACGGTGAAAGTAGGGAAGGCGATAGACGTAGACCAAGGGACAGCTTATATATACTTTCTACCATGGTTGAACGGTATGACGAAGAATATGGTCGAATTCCTTCCCTCTGTAAACGTGCGTTGCAATGCAATAAAGAAATCCAGAACAGAGGCGACGTGGCACATCAAGATAAAATGGAAGCTGGATTTAAAAGGCAATGCTTTGTATTCTTCCCTCGCTCACAAAATAATGTCAGTCTCTGCGTGAGCGAGCGCTTATTCAAGAATACAAAGGAAGAACTTGGAGGAATGGTGTGGGGACTCTTTCCCGTCGACCCTCTTTCGGGTGAAGATAAGTACTATATCTTTAGATGTGGAATCTACAAAATTGGTCGGAAAGGTTGCGATGTGATCATCACTAAAGATAAAGGGGTTTCACGGGTTCATGCAGAAATAGTCGTTCATGCAATGACCACATTAAATACTCTACAAAATGAGTCCTCTGACTTGGCACCTAGAGTGCTGATTAGAGATTGCTCGAAGTATGGAACATTTATTAGCAAGAATGGTGAGCCCAAGAAAAAAGTTCATGAGCTTCCAAACAAAGAAGTAGCACTAGAGGATGGCAACCTTGTTTCTTTTGGTACTGGTAGTGCAACCTACAGATTTTACCATATCCCGCTAGTGTTCTTTGTCTGTTCCTCAGATGAAGTGGATCAACGTGTTAAAGAGAGAGTTTCATCAATTGGTGGTCACATTACTAATACAATTAGTCAAGAGTGCACACATGTGCTGGTGGATCAGAAGATGCCTTTAACGAACGATCTGGTGGATGCTGTTGTAGCCAAGAAACCTTTTGTTCTCAAAACCTGGGTTGAGTTTGTTGCAGAAAAGAACATTGGCACTGAAATTCCGAGCTGTAATTCCTATATACCAACACTGTCAGTGGAAGGAGCATCTGTCAGAGTTGCCGACCCTAAAGCTCGTGAACACTGCCTAAAGGGATATACTTTCTTGCTGGAATCAATGCACTTGTACAAATTTGGGGCCAAGTTAAAATCTTTATTGGAAGTGGCTGGTGCAAAAATTGTTGCTTTTGAAGAATTTTGTTCAAATAGCCAAGGATCAGATTATGGAGATGAAAATTGTGTAGTTTGCATAATTCCAGGAGGACCGGGCAGCAAGTCTGACTGCTTCAATAAACTAAATTCCTTATCTAGGGTGAATGAGATGGACATAGTATGTGCTGCTTTAAGTGGACAGCTAGATCTGTCTATGTTGATATCACGCTGCGTACTTGTTTCATCTTCATGCTCTACAGATGAGACTATAGTAGCAGATTCTGATACTGAAGTTGAAACAGCTACATCAGCCCATGCAAGTGAGTCATTGTGCAAAGGAGATGATATAAAATGTGTAAAAGCAGAAAAATCATCGGATGATGTTCCTGCCAAAGTTGATGAGATGAAATATGAGAGAATGGAAACATCCTTGGGTGATGTTTCCGCCAGATTGGATGACTTAGAACGTAAAAGAACAGAAGCAGCCTTAAATGATACTTCCTCCGGGTTGGATAAAAGGGCTACCAGCTTCAGGGAAGGTAGTGGCAGTATGACAGTGAAGAAAGACGAGGTTGATGATTCTGAAAGTAGAAACTCAGATATCATTTACAGCCAAGATTTAATTGTCCGAGATATAAACATACCTGCTACTGGAAATGCTGCAGCAAACTGCAATCTTCCAAATTTTAAACGCTTTAGAAAGGTACATATACAGTCAGGGAATAGTTTCAGCAATCTTGTTCCATTTGCAAAATATCCGTACAAAGACTCTGACTATGGAAATGAGGAGATTAATAAGTCTGTAAAGGAGGAAAAAAAGCGAAAGCAAATGGAGGCTATTGCAGAAGACTTATTTAATAATGAGAAGGCAAGAAAGCGTGGCACAGCTGGCTCTCTTCGTGGCATTCTTATTTCATGA 2052 0.4123 MVQNSGFSLPPTSIIARPPLLPPSLCLKFCHNGESREGDRRRPRDSLYILSTMVERYDEEYGRIPSLCKRALQCNKEIQNRGDVAHQDKMEAGFKRQCFVFFPRSQNNVSLCVSERLFKNTKEELGGMVWGLFPVDPLSGEDKYYIFRCGIYKIGRKGCDVIITKDKGVSRVHAEIVVHAMTTLNTLQNESSDLAPRVLIRDCSKYGTFISKNGEPKKKVHELPNKEVALEDGNLVSFGTGSATYRFYHIPLVFFVCSSDEVDQRVKERVSSIGGHITNTISQECTHVLVDQKMPLTNDLVDAVVAKKPFVLKTWVEFVAEKNIGTEIPSCNSYIPTLSVEGASVRVADPKAREHCLKGYTFLLESMHLYKFGAKLKSLLEVAGAKIVAFEEFCSNSQGSDYGDENCVVCIIPGGPGSKSDCFNKLNSLSRVNEMDIVCAALSGQLDLSMLISRCVLVSSSCSTDETIVADSDTEVETATSAHASESLCKGDDIKCVKAEKSSDDVPAKVDEMKYERMETSLGDVSARLDDLERKRTEAALNDTSSGLDKRATSFREGSGSMTVKKDEVDDSESRNSDIIYSQDLIVRDINIPATGNAAANCNLPNFKRFRKVHIQSGNSFSNLVPFAKYPYKDSDYGNEEINKSVKEEKKRKQMEAIAEDLFNNEKARKRGTAGSLRGILIS 683
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere05g1160 683 CDD FHA_NBN 130 246 - -
Dere05g1160 683 ProSiteProfiles Forkhead-associated (FHA) domain profile. 152 211 IPR000253 GO:0005515
Dere05g1160 683 Coils Coil 515 535 - -
Dere05g1160 683 FunFam Nibrin 132 248 - -
Dere05g1160 683 SUPERFAMILY BRCT domain 259 322 IPR036420 -
Dere05g1160 683 Pfam FHA domain 152 239 IPR000253 GO:0005515
Dere05g1160 683 MobiDBLite consensus disorder prediction 538 570 - -
Dere05g1160 683 Gene3D - 119 249 - -
Dere05g1160 683 Gene3D BRCT domain 252 327 IPR036420 -
Dere05g1160 683 ProSiteProfiles BRCT domain profile. 252 316 IPR001357 -
Dere05g1160 683 SUPERFAMILY SMAD/FHA domain 140 257 IPR008984 GO:0005515
Dere05g1160 683 MobiDBLite consensus disorder prediction 541 560 - -
Dere05g1160 683 PANTHER NIBRIN-RELATED 129 504 IPR040227 GO:0006302|GO:0007095|GO:0030870
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere05g1160 05 18643109 18654276 Dere05g1160 05 18643109 18654276 ECH