Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere05g1123 ATGGCTTCTGCTTCAGCACCTGCCTTAAAGCGCACAAACTCGATTGCAGACAACATGCCTGATGCATTGCGTCAGAGTAGGTACCATATGAAGAGGTGCTTTCTTAAGTACCTTGAGAAGGGAAGGAGGGTCATGAAGCTTCACCATTTGATGGAGGAACTGGAGCAAGTCGTAGACGACAAGAGCGAGAGAAACCAAGTCTTGGAGGGCATTCTTGGCTACATTTTGGGTTCTACACAGGAAGCTGTTGTTTGTGCACCATATGTTGCCTTTGCAATAAGGTCAAGTCCTGGGGTTTGGGAATTTGTTAGAGTGAACCATGAGGACCTCTCTGTTGTGGGTATCTCCTCCACTGACTACCTGAAAATGAAAGAATTGGTGTATGACGAAGATTGGGCAAATGATGAAAACGCATTTGAAGCAGATTTTGGAGCATTTGACTTCCCTATTCCTCATTTAACCCTGCCTTCTTCAATTGGAAATGGAGTAACTTTTGCTTCGAAGTTCTTATCTTCAAAGCTAAGCGGGAAATTGGAGAAAACACATGCTCTAGTGGACTACTTGTCAAAACTAGAGCATCAGGGAGAAAAGCTGATGATAAATGACACCCTGAGCTCTGCTGTAAAGCTTCAGTTAGCACTAATAGTGGCTGACGTGTTCCTCTTAGCACTACCTAAGGACACTCCATATCAGAATTTTGAGCTAACGCTCAAAGAGTGGGGTTTTGAGAGAGGCTGGGGTGATACTGCAGAAAGAGTGAGGGAGACAATGAACACTCTGTCAGAAGTACTCGAAGCACCAGACCCGAAGAATCTCGAGAAGTTTTTTAACAGAATTCCCACAATTTTCAATGTGGTTATATTCTCTGTTCATGGTTATTTTGGACAAGCTGATGTCCTTGGCTTGCCAGATACCGGTGGTCAGGTAGTTTACATACTTGATCAAGTAAGGGCTCTGGAAGCAGAGTTGCTTCTCAGAATTAAGCAACAAGGGCTAACTGTGAAGCCTCAAATTCTTGTTGTCACCAGGCTCATACCTGATGCTCGAGGAACCAAATGCAACCAAGAGTTGGAACCAATCATTGATACCAAGCACTCTAACATTCTACGTGTGCCTTTTGTGACAGAGAAAGGAATCCTCCGTCAATGGGTTTCCCGCTTTGACATTTATCCCTATCTTGAGAGGTTTACTCAGGATGCTACTTCAAAGATTCTTGACCACTTGGAAGGGAAACCAGATCTTGTTATTGGAAATTACACTGATGGGAATTTGGTGGCGTCCCTAATGGCTAGTAAACTTGGGATAACTCTGGGAACTATAGCACACGCTTTAGAGAAGACAAAGTATGAAGATTCAGATGTCAAGTGGAAGGAGCTTGACCCCAAGTATCACTTCTCATGCCAATTCATGGCTGATACAATTGCAATGAATGCAGCAGATTTCATCATAACCAGCACATACCAGGAAATTGCGGGAAGCAAAGATAGACCCGGACAGTATGAAAGCCATGCTGCATTTACGCTTCCGGGGCTCTGTAGAGTTGTTTCAGGAATAAACGTATTTGATCCCAAGTTCAACATAGCTGCGCCTGGAGCTGACCAGTCTGTCTACTTCCCTTATGCCGAGAAAGAAAAACGACTCACTAAATTTCACCCTGCCATTGAAGAGCTACTGTATGGTAAAGTGGACAATAGTGAGCATATTGGATCTCTATCAGACAGGAGAAAACCCATCATCTTCTCAATGGCAAGGCTTGATGTTGTGAAGAACTTAACTGGGTTAGTTGAGTGGTATGGGAAGAACAAGAGATTGAGAAATTTTGTGAACCTTGTCATAGTTGGAGGCTTCTTTGACCCTTCAAAATCCAAAGACAGGGAGGAAATGGCAGAAATAAGAAAGATGCATTCTTTAATTGAAAAATACCAACTAAAGGGTCAATTCAGATGGATTGCGGCACAGACTGACAGACATCGCAATGGAGAACTCTACCGATTCATTGCTGACACCAAGGGAGCTTTTGTGCAGCCTGCTTTATATGAAGCATTTGGTCTTACTGTCATTGAAGCAATGAACTGTGGCTTGCCCACTTTTGCTACAAACCAAGGAGGTCCAGCAGAAATTATTGTTGATGGGGTCTCTGGATTCCACATTGATCCCCTTAATGGTGAAGAATCAAGCAACAAAATTGCTGATTTCTTTGAGAAATGCAACGTGGATTCAACACACTGGAACAAGATTTCAGCTGCTGGATTGAGGCGTATAAACGAATGCTATACCTGGGAGATCTATGCAAATAAGCTGCTGAATATGGGAAGCCTTTACACATTCTGGATGACAGTAAATAAGGAGCAAAAAGAAGCAAAACAAAGATACATCCATATGTTCTATAATCTTTTATTCAAGAATTTGGTGAAGAATGTACCTGTTCCAAGTGATGAACCTCAACAACCAGTGTCCAAGCAGCAGACTCTCAAGCAACAGGGCACAAGACGTTCACAATCCAAATTGTCAAGGTTATTCGGAGCTTGA 2529 0.4294 MASASAPALKRTNSIADNMPDALRQSRYHMKRCFLKYLEKGRRVMKLHHLMEELEQVVDDKSERNQVLEGILGYILGSTQEAVVCAPYVAFAIRSSPGVWEFVRVNHEDLSVVGISSTDYLKMKELVYDEDWANDENAFEADFGAFDFPIPHLTLPSSIGNGVTFASKFLSSKLSGKLEKTHALVDYLSKLEHQGEKLMINDTLSSAVKLQLALIVADVFLLALPKDTPYQNFELTLKEWGFERGWGDTAERVRETMNTLSEVLEAPDPKNLEKFFNRIPTIFNVVIFSVHGYFGQADVLGLPDTGGQVVYILDQVRALEAELLLRIKQQGLTVKPQILVVTRLIPDARGTKCNQELEPIIDTKHSNILRVPFVTEKGILRQWVSRFDIYPYLERFTQDATSKILDHLEGKPDLVIGNYTDGNLVASLMASKLGITLGTIAHALEKTKYEDSDVKWKELDPKYHFSCQFMADTIAMNAADFIITSTYQEIAGSKDRPGQYESHAAFTLPGLCRVVSGINVFDPKFNIAAPGADQSVYFPYAEKEKRLTKFHPAIEELLYGKVDNSEHIGSLSDRRKPIIFSMARLDVVKNLTGLVEWYGKNKRLRNFVNLVIVGGFFDPSKSKDREEMAEIRKMHSLIEKYQLKGQFRWIAAQTDRHRNGELYRFIADTKGAFVQPALYEAFGLTVIEAMNCGLPTFATNQGGPAEIIVDGVSGFHIDPLNGEESSNKIADFFEKCNVDSTHWNKISAAGLRRINECYTWEIYANKLLNMGSLYTFWMTVNKEQKEAKQRYIHMFYNLLFKNLVKNVPVPSDEPQQPVSKQQTLKQQGTRRSQSKLSRLFGA 842
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere05g1123 842 FunFam Sucrose synthase 14 151 - -
Dere05g1123 842 Gene3D - 13 151 - -
Dere05g1123 842 Gene3D Glycogen Phosphorylase B; 533 760 - -
Dere05g1123 842 NCBIfam sucrose synthase 28 808 IPR012820 GO:0005985|GO:0016157
Dere05g1123 842 Gene3D - 152 281 - -
Dere05g1123 842 MobiDBLite consensus disorder prediction 812 836 - -
Dere05g1123 842 FunFam Sucrose synthase 533 760 - -
Dere05g1123 842 Gene3D Glycogen Phosphorylase B; 286 803 - -
Dere05g1123 842 FunFam Sucrose synthase 152 281 - -
Dere05g1123 842 Coils Coil 51 71 - -
Dere05g1123 842 Pfam Sucrose synthase 11 559 IPR000368 GO:0005985|GO:0016157
Dere05g1123 842 MobiDBLite consensus disorder prediction 810 842 - -
Dere05g1123 842 Pfam Glycosyl transferases group 1 570 735 IPR001296 GO:0016757
Dere05g1123 842 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 302 769 - -
Dere05g1123 842 PANTHER - 9 812 IPR012820 GO:0005985|GO:0016157
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere05g1123 Dere-ChrDere05 18107272 18112368 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere05g1123 7 813 Glycosyltransferase AT4G02280 57.249 0.0 978
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere05g1123 05 18107272 18112368 Dere05g1123 05 18107272 18112368 ECH