Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere05g1047 ATGGAAATAAGTACAGCAAGTGATAATAATGACGATGGTCTTTTTAATCTGAGTAGGTGTTGTCTAGACCCACAGCCACAGACTTTATTGTTTTCAAGAATTTCAAGAACTTTGGGATGGGCAAACACTCATAATCTTTCATATAATGTGGCTGCCCAGAGATCAAGGTTGGGCTATCGAGGCTTGGCCTCTTCCTACCCAACCTTTATTGCAGTGTTTCCAATGAGGCCTTTTTTCTGTGGACCGCATTCTACGCCAACTAGTTTGGAGGAGTCTACATTGCTACAGTCTGAAGGTGATTCAAGTGAGGATGAGGATGCATCTGCAGACTCAAAAGAGGAGATTTTGGCGCAACCACTGACAAGTGAACAGATGATGGCTCTACTTGCTGATAATGAAAGAACGAAGCTTACAAAGAAGCTTAGTGAAGCCAACCAGCAAAATCGGTTCCTCAAAAGACAGTTGCACACAACGGAGGAAGCATTGGTTAACTTTAAGCGTGAACTTGCTGTCATGGAGCTTGAAGTTCAGGCTTTGGTCAAACTTGCTGAAGAAATAGCGCAGTCTGCTATTCCAGATGGTTCAAGGAAGATTAATGGAAAATATATCCAATCTCACCTTGTTTCTCGATTAGAAGCTATGAATGAAAAATTGAAGGAACAGATAAAGGATGTAGATTCAGCGCAATCAAAGGAGGTTCCTGTATTTTGGGTTGGCATGGCTGAGAGCGTGCAAGTTATGGGCACCTTTGATGGATGGAGCCAAGGAGAGCACCTATCACCGGAATATGATGGTTCTTACACAAAGTTCTCTTCAACATTGATGCTCAGACCAGGAAGGTATGAAATTAAATTCTTGGTAGATGGTGAATGGCAGCTTTCACCGGAGTTTCTCACTGTTGGTGAGGGATTAACCAAAAATAATCTTTTAGTTGTGGAATGA 942 0.4214 MEISTASDNNDDGLFNLSRCCLDPQPQTLLFSRISRTLGWANTHNLSYNVAAQRSRLGYRGLASSYPTFIAVFPMRPFFCGPHSTPTSLEESTLLQSEGDSSEDEDASADSKEEILAQPLTSEQMMALLADNERTKLTKKLSEANQQNRFLKRQLHTTEEALVNFKRELAVMELEVQALVKLAEEIAQSAIPDGSRKINGKYIQSHLVSRLEAMNEKLKEQIKDVDSAQSKEVPVFWVGMAESVQVMGTFDGWSQGEHLSPEYDGSYTKFSSTLMLRPGRYEIKFLVDGEWQLSPEFLTVGEGLTKNNLLVVE 313
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere05g1047 313 Gene3D Immunoglobulins 223 312 IPR013783 -
Dere05g1047 313 SUPERFAMILY E set domains 233 312 IPR014756 -
Dere05g1047 313 Pfam Glycogen recognition site of AMP-activated protein kinase 236 310 IPR032640 -
Dere05g1047 313 CDD E_set_AMPKbeta_like_N 232 312 - -
Dere05g1047 313 Coils Coil 127 175 - -
Dere05g1047 313 PANTHER PROTEIN PTST, CHLOROPLASTIC 20 313 - -
Dere05g1047 313 Coils Coil 208 231 - -
Dere05g1047 313 MobiDBLite consensus disorder prediction 89 111 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere05g1047 Dere-ChrDere05 16826242 16831449 Dispersed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere05g1047 05 16826242 16831449 Dere05g1047 05 16826242 16831449 ECH