Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere05g0995 ATGGCTGCTTCCCTCTCCACTGTCGGAGCAGTTAACAGAACTCCACTGAGCATTAATGGGTCAGGAGCTGGAACTTCGGTTCCTGGCTCAGCCTTCATGGGCACAAGCTTGAAGAAGATCGCTTCAAGACTCCCCAGCACCAAGATTTCCTCTGGGAGCTTTAGGATTGTTGCTGCAGAGAAAGAAATTGATGAGGAACAACAGACGGACAAAGACAGATGGAGGGGTCTAGCCTATGATGTTTCAGATGACCAGCAAGACATCACAAGGGGGAAGGGTATGGTGGATAGCCTCTTCCAAGCTCCCCAGGAAGCTGGAACTCACTATGCTGTCATGAGCTCCTATGAGTACATCAGTACTGGTCTTCGCCAGTACAACCTTGACAACAACATGGACGGCTTTTACATTGCCCCTGCTTTCATGGACAAACTTGTCGTCCACGTCACCAAGAACTTCATGACCCTGCCCAACATCAAGGTTCCTCTCATCCTTGGTATCTGGGGAGGCAAAGGTCAAGGGAAATCTTTCCAATGTGAGCTTGTCTTTGCCAAGATGGGAATCAACCCGATCATGATGAGTGCTGGAGAGCTGGAAAGTGGAAACGCTGGAGAGCCTGCGAAGCTGATTAGACAAAGGTACCGTGAAGCAGCGGACATTATCAGGAAAGGAAAGATGTGTGCCCTGTTCATCAACGATCTGGATGCAGGAGCTGGTCGTATGGGTGGGACCACCCAATACACAGTGAACAACCAGATGGTCAACGCCACCCTCATGAACATCGCCGACAACCCGACCAACGTGCAGCTCCCAGGTATGTACAACAAGGAGGAGAACCCACGTGTCCCCATCATCGTCACCGGTAACGACTTCTCCACTCTCTACGCTCCTCTCATTCGTGATGGTCGTATGGAGAAGTTCTACTGGGCACCCACCAGGGACGACCGTATTGGTGTCTGCAAGGGAATCTTCCGTACTGATGGTGTTCGTGATGAGGACATCGTCAAGCTTGTTGACACCTTCCCTGGTCAATCCATCGATTTCTTCGGTGCACTGAGGGCCAGAGTATATGACGATGAAGTGAGGAAGTGGGTTTCTGGGGTAGGAGTTGACAGCATCGGGAAGAAGCTTGTGAACTCAAAGGAAGGACCTCCGACCTTTGAGCAGCCCAAGATGACTGTGGAGAAGCTGCTGGAGTATGGATTCATGCTCGTCAAGGAGCAAGAGAATGTGAAGAGAGTCCAATTGGCTGACAAGTACCTGAATGAGGCTGCTCTTGGTGATGCCAATGAAGATGCTATTAAGTCGGGATCTTTCTATGGCAAAGCAGCCCAGCAAGTAGGTGTACCTGTTCCTGAAGGTTGTACTGATCCAAATGCCTCAAACTTTGACCCAACTGCAAGGAGTGATGATGGAACCTGCTTATACACATTCTAA 1434 0.5021 MAASLSTVGAVNRTPLSINGSGAGTSVPGSAFMGTSLKKIASRLPSTKISSGSFRIVAAEKEIDEEQQTDKDRWRGLAYDVSDDQQDITRGKGMVDSLFQAPQEAGTHYAVMSSYEYISTGLRQYNLDNNMDGFYIAPAFMDKLVVHVTKNFMTLPNIKVPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAADIIRKGKMCALFINDLDAGAGRMGGTTQYTVNNQMVNATLMNIADNPTNVQLPGMYNKEENPRVPIIVTGNDFSTLYAPLIRDGRMEKFYWAPTRDDRIGVCKGIFRTDGVRDEDIVKLVDTFPGQSIDFFGALRARVYDDEVRKWVSGVGVDSIGKKLVNSKEGPPTFEQPKMTVEKLLEYGFMLVKEQENVKRVQLADKYLNEAALGDANEDAIKSGSFYGKAAQQVGVPVPEGCTDPNASNFDPTARSDDGTCLYTF 477
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere05g0995 477 FunFam Ribulose bisphosphate carboxylase/oxygenase activase, chloroplastic 126 310 - -
Dere05g0995 477 PANTHER - 21 475 IPR044960 -
Dere05g0995 477 FunFam Ribulose bisphosphate carboxylase/oxygenase activase, chloroplastic 311 423 - -
Dere05g0995 477 Pfam ATPase family associated with various cellular activities (AAA) 166 307 IPR003959 GO:0005524|GO:0016887
Dere05g0995 477 Gene3D - 311 423 - -
Dere05g0995 477 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 140 342 IPR027417 -
Dere05g0995 477 Gene3D - 126 310 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere05g0995 Dere-ChrDere05 16075160 16078210 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere05g0995 05 16075160 16078210 Dere05g0995 05 16075160 16078210 ECH