Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere05g0982 ATGAAAGCCCTCATCAATGGCGATTTGTTCAAAACACCCTCTTTTCTCAAGATCGCTGCTTTCTTCTTCGTGACGGTCACTTTCTTCTTCTTAGGCAAGCACTGGTCCGATGGGTCCCAGCAGCTCGTCTTCTTCACCAGTACTCAAGAGGAGCCAGCGGTTTTAACGTCCCCGAATTACAACAAATTCTTTAATATCTCTGCCCTCATTGGTCAGAATCAGACCCAATCACAGCCGGAGAAAGCCCTAGCAGCTGTGCCCCATGTCGCACCGCAAGCTTCCGCTCCCCCGCCGCCGCCACCGCCTCCGCCGGGGGATCCGGTCAGGACATTCGGGATCCTCAACGAGAATGGCACGATGTCCGATGACTTCGAGGTTGGGGATTTTGATCCGGAGCTGGTCGATAATTGGGTCAATGAGACTCAAATTGAAACGGAGGAGAGTTCTGCGTCTGCTGCCCAATTTACAATAAAGAAGTTTGGGTTATGTCCGCGGAACATGAGTGAGTATATTCCTTGTTTAGATAATCTAGAGGCAATTCAGAAGCTAAAGTCGACGGAAAGAGGAGAAAGGTTCGAGAGGCGTTGTCCTGAGGAAGATAGAAGGTTGAATTGCTTGGTTCCGGCGCCTAAAGGGTATCGTACTCCAATTCCTTGGCCGAAAAGTCGAGATGAGGTATGGTACAATAATGTTCCTCATACTCGTCTCGTTGAGGATAAAGGGGGTCAGAACTGGATTTCTAAAGACAAAGATAAGTTTAAATTTCCAGGAGGTGGTACACAGTTCATACATGGGGCAGATGAATACTTGGATCATATTTCTAAGATGATACCTGAAATTGCATTTGGTCATAATACAAGGGTTGTTTTAGATGTTGGCTGTGGTGTAGCTAGTTTTGGTGCGTACTTGTTATCACGAAATGTCCTCACTTTGTCCATCGCTCCCAAAGATGTTCATGAGAATCAGATTCAATTTGCTCTTGAGCGCCACGTACCTGCAATGGTGGCAGCATTTGCAACAAGACGTTTACGATATCCAAGTCAGGCTTTTGACTTGATACATTGTTCACGCTGCAGAATCAATTGGACTCAAGATGATGGGATGTGGCTGCTTGAACTTAATAGGATGCTAAGGGCAGGAGGGTACTTTGTCTGGGCAGCGCAGCCAGTTTACAAGCATGAGGAAATTTTGGAAGAACAATGGGAAGAGATGCTTAATCTTACCACTCGTCTCTGCTGGAAGTTTTTGAAAAAAGATGGATACATTGCAATATGGCAGAAACCTTCTGACAACAGCTGCTATCTGAACCGTGAGGAAGGAACTAAGCCTCCACTATGTGACACAAGTGATGACCCAGACAATGTTTGGTATGTTAATCTTAAAGCATGCATCTCTCAATTGCCTGAGAATGGATATGGAGCAAATATTACAAGATGGCCTGCACGCTTACAAACTCCACCTGATAGGCTTCAAAGTATAAAATTTGATGCTTTTATATCCAGAAAAGAACTATTTACAGCAGAAACAAAATACTGGAATGAGATAATAGCAGGCTATGTCCGTGCATTGCACTGGAAGAAGATGAGATTAAGAAATGTAATGGATATGAAAGCAGGTTTTGGAGGATTTGCAGCTGCCTTAATTGATCAGAATCTTGACAGCTGGGTTATGAATGTAGTTCCAGTCAGTGGCCCAAACACCTTGCCTGTTATATATGACCGTGGGTTGATTGGAGTTATGCATGACTGGTGTGAACCATTTGACACGTATCCGAGAACCTATGATTTACTGCATGCAGCAAACCTGCTTTCTATTGAGAGGAAAAGATGCAATATTTCATCAATTATGCTTGAGATGGATCGGATACTAAGACCTGGCGGACGGGTATATATCCGTGATTCTCTTGCCATCATGGATGAACTTCAAGAGATTGCTAAGGCAATGGGCTGGCACGTTACATTGCGAGATACATCCGAGGGGCCTCATGCAAGTTATAGGATCTTGGTTGGTGATAAGCACTTACTCCGGGCTTGA 2034 0.4474 MKALINGDLFKTPSFLKIAAFFFVTVTFFFLGKHWSDGSQQLVFFTSTQEEPAVLTSPNYNKFFNISALIGQNQTQSQPEKALAAVPHVAPQASAPPPPPPPPPGDPVRTFGILNENGTMSDDFEVGDFDPELVDNWVNETQIETEESSASAAQFTIKKFGLCPRNMSEYIPCLDNLEAIQKLKSTERGERFERRCPEEDRRLNCLVPAPKGYRTPIPWPKSRDEVWYNNVPHTRLVEDKGGQNWISKDKDKFKFPGGGTQFIHGADEYLDHISKMIPEIAFGHNTRVVLDVGCGVASFGAYLLSRNVLTLSIAPKDVHENQIQFALERHVPAMVAAFATRRLRYPSQAFDLIHCSRCRINWTQDDGMWLLELNRMLRAGGYFVWAAQPVYKHEEILEEQWEEMLNLTTRLCWKFLKKDGYIAIWQKPSDNSCYLNREEGTKPPLCDTSDDPDNVWYVNLKACISQLPENGYGANITRWPARLQTPPDRLQSIKFDAFISRKELFTAETKYWNEIIAGYVRALHWKKMRLRNVMDMKAGFGGFAAALIDQNLDSWVMNVVPVSGPNTLPVIYDRGLIGVMHDWCEPFDTYPRTYDLLHAANLLSIERKRCNISSIMLEMDRILRPGGRVYIRDSLAIMDELQEIAKAMGWHVTLRDTSEGPHASYRILVGDKHLLRA 677
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere05g0982 677 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 506 652 IPR029063 -
Dere05g0982 677 PANTHER SAM-DEPENDENT METHYLTRANSFERASE 142 669 IPR004159 GO:0008168
Dere05g0982 677 MobiDBLite consensus disorder prediction 91 106 - -
Dere05g0982 677 FunFam probable methyltransferase PMT3 265 428 - -
Dere05g0982 677 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 205 404 IPR029063 -
Dere05g0982 677 Pfam Putative S-adenosyl-L-methionine-dependent methyltransferase 169 672 IPR004159 GO:0008168
Dere05g0982 677 Gene3D Vaccinia Virus protein VP39 264 435 IPR029063 -
Dere05g0982 677 MobiDBLite consensus disorder prediction 80 106 - -
Dere05g0982 677 CDD AdoMet_MTases 289 384 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere05g0982 Dere-ChrDere05 15915335 15920496 Dispersed/Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere05g0982 05 15915335 15920496 Dere05g0982 05 15915335 15920496 CCT
Dere05g0982 05 15915335 15920496 Dere05g0982 05 15915335 15920496 ECH