Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere05g0981 ATGGGTGACTTCAAGCCCTTCTCGCACTCGGACCCGGCCTCGGCCTCGATCTCAAGGTCAATAAGCGAGACGGTTGATGGTTCACACCAATTTATCATAAAGGGGTATTCTTTGATTAAAGGGATGGGTGCTGGGAGGTATATAATGAGCGACACATTCAGTGTTGGTGGCTACGATTGGGCGATTTATTTCTACCCGGATGGTAAGAACCCAGAGGACAATGCCATGTACGTTTCGGTTTTTATAGCTTTGGCGAGCGAGGGAACAGACGTTAGGGCGTTGTTCAAGTTGACTTTGGTCGATCAGAGTGCGAAGGGCAATGATAAAGTGCATAGTCATTTTGATCGCCCACTGGAGAGTGGACCCTATGCATTGAAGTATAGAGGCAGCATGTGGGGTTATAAGCGTTTTTTCAGAAGAACGTTATTGGAACATTCAGAGTATTTGAAAGATGATTGCCTTGTCATGCATTGCACTGTTGGTGTTGTTAAAACTCGTCTTGAGGGAGCTAAACAGAATGTTAATTTACTACAGTCTGATATGGGTCAAGATCTTAAGGATTTGTTAGAATCTGAAGTAGGTTGTGACATAGTTTTTAAAGTTGGGAATGAAAGCTTCAAAGCTCATAAATTAATACTTGCTGCTCGATCTCCTGTGTTTAAAGCTCAGTTTTTCGGACTTGTTGGGGATCCTAGCATAGATGAAGTGATGTTGGAGGATATCGAGCCTTTTATCTTCAAGGCAATGCTTCTCTTCATTTATACAGACAAACTTCCCAGCATCCATGAGGTTATGGGCTCAATACCCATGTGCTCGCAAACTGTCATGGTGCAGCATCTATTGGCTGCTGCTGATCTGTATAATCTTGATCGCCTGAAACTGTTATGTGAATCAAATTTGTGTGAAGAAATCAATACTGACACTGTGGCGACAACACTTGCACTGGCTGAGCAGCATCACTGTCCACAGCTTAAGGCAATCTGTTTAAAATTTGTTGCAAATCCGGCAAATTTGGGAGTGGTAATGCAGTCTGAAGCTTTCGTGAACTTGAAGGAGAGCTGTCCCTCAATGTTGTTGGAGTTGCTGGGGACATTTGCATCGGTAGAAGAAAATTCAAGCCAGCCGTTGAGCAGGAAGAGAAGTGGCAGTAGCATATATGGGCAAGATTTAGCAGATGGAACGGCAGAAGAATTGGCTAATCCAAATGACAGGCATGTCAGGAGGCGGACGTAG 1233 0.4404 MGDFKPFSHSDPASASISRSISETVDGSHQFIIKGYSLIKGMGAGRYIMSDTFSVGGYDWAIYFYPDGKNPEDNAMYVSVFIALASEGTDVRALFKLTLVDQSAKGNDKVHSHFDRPLESGPYALKYRGSMWGYKRFFRRTLLEHSEYLKDDCLVMHCTVGVVKTRLEGAKQNVNLLQSDMGQDLKDLLESEVGCDIVFKVGNESFKAHKLILAARSPVFKAQFFGLVGDPSIDEVMLEDIEPFIFKAMLLFIYTDKLPSIHEVMGSIPMCSQTVMVQHLLAAADLYNLDRLKLLCESNLCEEINTDTVATTLALAEQHHCPQLKAICLKFVANPANLGVVMQSEAFVNLKESCPSMLLELLGTFASVEENSSQPLSRKRSGSSIYGQDLADGTAEELANPNDRHVRRRT 410
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere05g0981 410 Gene3D - 305 384 - -
Dere05g0981 410 MobiDBLite consensus disorder prediction 391 410 - -
Dere05g0981 410 ProSiteProfiles MATH/TRAF domain profile. 26 160 IPR002083 GO:0005515
Dere05g0981 410 SMART math_3 31 143 IPR002083 GO:0005515
Dere05g0981 410 FunFam BTB-POZ and math domain 1 171 298 - -
Dere05g0981 410 Pfam BTB/POZ domain 185 302 IPR000210 GO:0005515
Dere05g0981 410 PANTHER BTB/POZ AND MATH DOMAIN-CONTAINING PROTEIN 1 19 360 IPR045005 GO:0016567
Dere05g0981 410 ProSiteProfiles BTB domain profile. 195 262 IPR000210 GO:0005515
Dere05g0981 410 SUPERFAMILY TRAF domain-like 23 162 - -
Dere05g0981 410 CDD MATH 27 160 IPR002083 GO:0005515
Dere05g0981 410 SUPERFAMILY POZ domain 174 302 IPR011333 -
Dere05g0981 410 CDD BACK_AtBPM-like 301 364 IPR034090 -
Dere05g0981 410 CDD BTB_POZ_BPM_plant 181 301 - -
Dere05g0981 410 Gene3D Apoptosis, Tumor Necrosis Factor Receptor Associated Protein 2; Chain A 25 165 IPR008974 GO:0005515
Dere05g0981 410 SMART BTB_4 195 304 IPR000210 GO:0005515
Dere05g0981 410 Gene3D Potassium Channel Kv1.1; Chain A 168 304 IPR011333 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere05g0981 Dere-ChrDere05 15888379 15893189 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere05g0981 05 15888379 15893189 Dere05g0981 05 15888379 15893189 ECH