Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere05g0973 ATGCGGCTCATTCATATCTTCCGCCGCCCCGCTCTCCCGACACTCAACTACAGTGCGTTGGGCATGGATGCCGCAGATCCTTCTCGAGCTTTTGTCAAGGACGTTAAGCGCCTTATCATCAAGGTTGGGACTGCTGTTGTGACGCGTGAAGATGGAAGATTAGCAGTTGGAAAATTGGGATCGGTCTGTGAGCAAATTTCGGAGCTTAATTCTCTAGGATATGAGGTTATTTTGGTGTCATCAGGTGCTGTTGGCGTTGGTCGCCAAAGGCTTAGATATCGGAAATTAGTTAACAGCAGCTTTGCTGATCTACAAAAGCCACAAGTTGAACTTGATGGCAAGGCATGTGGGGCAGTTGGACAAAACAGTCTAATGGCAATATATGATGCTTTATTCACTCAGCTGGATGTAACATCTGCTCAACTTCTCGTGACAGACAATGATTTTAGAGATAAAGATTTTAGAAAGCAACTTGCTGAAACTGTGAATTCCTTGTTAGCACTAAAAGTTGTACCGATATTCAATGAAAATGACGCTGTCACTACTAGGAAAGCTCCATATGAGGATTCTTCTGGTATATTTTGGGACAATGACAGTTTATCAGCTTTATTGGCCTTGGAGTTAAAAGCTGATCTTCTTGTTCTGTTGAGTGATGTAGAGGGTCTTTATAGTGGCCCTCCAAGTGAGCCGCACTCAAAGCTTATTCATACATATATCAAGGAGAGGCATCAGAATAAAATTACTTTTGGAGACAAGTCTAGGGTGGGAAGGGGTGGAATGACTGCCAAAGTAAAAGCTTCTATAAATGCAGCTGAAGCTGGCATTCCTGTTATTGTTACCAGTGGTAATGCAGCTGAAAATATCATTAAAATCCTCCAAGGACAACGTATTGGAACCCTCTTCCATAAAGATGCTCATAAGTGGACCCCAGTAAAAGAGGTTGATGCACGTGAAATGGCAGTTGCAGCTAGGGACTGTTCCAGACGGCTTCAGGCCTTATCTGCAGAAGAGAGGAAGCAAATTTTGCTCAATATAGCTGATACACTGGAAGCAAATGAAAAGGAGATCAGGATTGAAAACGAGGCTGATGTCACTGATGCACAAGAAGCAGGATATGAAAAATCCTTGGTTGCCAGGCTGCTTTTAAAGCCTGGGAAGATTGCAAGCCTTGCAAACAACATGAGAACTCTTGCAAACATGGAAGATCCAATTGGTCAAGTATTAAAACGGACTGAGCTTGCAGATGGGCTAATTTTAGAGAAAATATCATCTCCTTTGGGAGTTCTCTTGATTGTTTTTGAGTCTCGCCCTGATGCCCTTGTACAGATTGCTTCCTTGGCAATTCGAAGTGGAAATGGTCTACTCTTGAAAGGAGGCAAGGAGGCTAAGCGATCAAATGCAATTTTGCACAAACTAATTACCCAAGCCATCCCTGAAGCTGTTGGTGGAAAACTTATTGGACTTGTGACCTCAAGAGCGGAGATTCCTGAGCTGCTTAAGCTTGATGATGTAATTGATCTGGTTATTCCACGGGGCAGCAACAAACTTGTCTCTCAGATAAAGAGTTCCACAAAAATTCCTGTTCTGGGTCACGCTGATGGAATTTGCCACGTCTATGTTGATAAGTCTGCCAATATTGATATGGCAAGGCGGATTGTACTGGATGCAAAAGTAGATTATCCAGCCAGTTGCAATGCTATGGAAACACTACTTGTTCACAAGGACATAATGGAGAAAGGTTGGCTCAATGATTTTATTGTTGACCTACGAACTGAAGGTGTTACATTGTTTGGCGGACCGAAGGCAAGTTCATTGTTGAATATTCCAACAGTGCATTCATTTCATCATGAGTACAGTTCGTTGGCTTGCACTGTGGAAATCGTGGATGATGTGTATTCTGCTATTGATCATATAAATCTTAATGGAAGTGCACATACTGATTGCATAATTGCTGAAGATCACGAAGTTGCTGATGTGTTTCTACGCCAAGTAGACAGTGCCGCTGTCTTTCACAATGCTAGCACTAGATTTTGTGATGGGGCACGATTTGGACTGGGTGCAGAGGTTGGAATAAGTACAAGCAGGATTCATGCTCGGGGTCCAGTAGGAGTTGAGGGATTGTTAACAACCCGATGGATACTTAGAGGAAGTGGACAAGTAGTTGATGGTGATAAAGGAGTTAATTATACCCACAAATACCTTAGTGCTTGA 2211 0.4283 MRLIHIFRRPALPTLNYSALGMDAADPSRAFVKDVKRLIIKVGTAVVTREDGRLAVGKLGSVCEQISELNSLGYEVILVSSGAVGVGRQRLRYRKLVNSSFADLQKPQVELDGKACGAVGQNSLMAIYDALFTQLDVTSAQLLVTDNDFRDKDFRKQLAETVNSLLALKVVPIFNENDAVTTRKAPYEDSSGIFWDNDSLSALLALELKADLLVLLSDVEGLYSGPPSEPHSKLIHTYIKERHQNKITFGDKSRVGRGGMTAKVKASINAAEAGIPVIVTSGNAAENIIKILQGQRIGTLFHKDAHKWTPVKEVDAREMAVAARDCSRRLQALSAEERKQILLNIADTLEANEKEIRIENEADVTDAQEAGYEKSLVARLLLKPGKIASLANNMRTLANMEDPIGQVLKRTELADGLILEKISSPLGVLLIVFESRPDALVQIASLAIRSGNGLLLKGGKEAKRSNAILHKLITQAIPEAVGGKLIGLVTSRAEIPELLKLDDVIDLVIPRGSNKLVSQIKSSTKIPVLGHADGICHVYVDKSANIDMARRIVLDAKVDYPASCNAMETLLVHKDIMEKGWLNDFIVDLRTEGVTLFGGPKASSLLNIPTVHSFHHEYSSLACTVEIVDDVYSAIDHINLNGSAHTDCIIAEDHEVADVFLRQVDSAAVFHNASTRFCDGARFGLGAEVGISTSRIHARGPVGVEGLLTTRWILRGSGQVVDGDKGVNYTHKYLSA 736
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere05g0973 736 NCBIfam delta l-pyrroline-5-carboxylate synthetase 29 734 IPR005766 GO:0003824|GO:0006561
Dere05g0973 736 NCBIfam glutamate-5-semialdehyde dehydrogenase 323 710 IPR000965 GO:0004350|GO:0006561
Dere05g0973 736 PANTHER GLUTAMATE SEMIALDEHYDE DEHYDROGENASE 22 735 - -
Dere05g0973 736 SUPERFAMILY ALDH-like 315 720 IPR016161 GO:0016491
Dere05g0973 736 Hamap Glutamate 5-kinase [proB]. 36 305 IPR005715 GO:0005737|GO:0006561
Dere05g0973 736 NCBIfam glutamate 5-kinase 36 307 IPR005715 GO:0005737|GO:0006561
Dere05g0973 736 ProSitePatterns Gamma-glutamyl phosphate reductase signature. 628 650 IPR020593 GO:0004350|GO:0006561
Dere05g0973 736 CDD ALDH_F18-19_ProA-GPR 317 717 IPR000965 GO:0004350|GO:0006561
Dere05g0973 736 FunFam Delta-1-pyrroline-5-carboxylate synthase 25 308 - -
Dere05g0973 736 SUPERFAMILY Carbamate kinase-like 36 301 IPR036393 -
Dere05g0973 736 PRINTS Glutamate 5-kinase family signature 157 178 IPR001057 GO:0005524|GO:0016301
Dere05g0973 736 PRINTS Glutamate 5-kinase family signature 255 275 IPR001057 GO:0005524|GO:0016301
Dere05g0973 736 PRINTS Glutamate 5-kinase family signature 196 223 IPR001057 GO:0005524|GO:0016301
Dere05g0973 736 PRINTS Glutamate 5-kinase family signature 73 87 IPR001057 GO:0005524|GO:0016301
Dere05g0973 736 PRINTS Glutamate 5-kinase family signature 117 145 IPR001057 GO:0005524|GO:0016301
Dere05g0973 736 FunFam Delta-1-pyrroline-5-carboxylate synthase 306 425 - -
Dere05g0973 736 Gene3D - 26 309 IPR036393 -
Dere05g0973 736 PIRSF P5C_synthetase 7 736 IPR005766 GO:0003824|GO:0006561
Dere05g0973 736 Hamap Gamma-glutamyl phosphate reductase [proA]. 315 721 IPR000965 GO:0004350|GO:0006561
Dere05g0973 736 ProSitePatterns Glutamate 5-kinase signature. 253 270 IPR019797 GO:0004349|GO:0006561
Dere05g0973 736 Pfam Amino acid kinase family 36 281 IPR001048 -
Dere05g0973 736 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 533 679 IPR016163 GO:0016620
Dere05g0973 736 FunFam Delta-1-pyrroline-5-carboxylate synthase 533 679 - -
Dere05g0973 736 Pfam Aldehyde dehydrogenase family 312 579 IPR015590 GO:0016491
Dere05g0973 736 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 325 719 IPR016162 GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere05g0973 Dere-ChrDere05 15843092 15853131 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere05g0973 05 15843092 15853131 Dere05g0973 05 15843092 15853131 CCT
Dere05g0973 05 15843092 15853131 Dere05g0973 05 15843092 15853131 ECH