Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere05g0954 ATGGAAACTTTATCTAAGAAGTGTGAGACTTTTCAAAAGAAGAGAGATGGGGTTCGGTCCTCCGGAGGCAAAGCAGCTAAATCTGAGTCATTCACCGATTCGAGTGCTGAGTCGAGAGAAACAAGTTCAAGTGGATCGAGCTCCTCCGATTCTGCTGAAGAAGCTAAAGCAAAAGGGTCATCTTCGCCTGCTCCTCTTGGATGGCCTATTCGCAAGGCTACAGTTTCAAAGTGCTGTAAATCTGATGAAAAGGAAGACGAACATATTTCCCATCAGGACAATTCAAAGTTTAGCAGAATCGGTTCAAAAATGTCAGATACTGATATGATGAAGGAAAGGTTTGCAAAACTACTGCTGGGTGAAGATATGTCAGGGTCTGGAAAAGGGGTTTGCACAGCTTTGGCCATCTCAAATGCTATTACCAATCTCTGTGCCACTGTATTTGGGCAACTATGGAGACTTGAACCTCTGCCTGCTGAAAAGAAGGCATTGTGGCGAAGAGAGATGGAATGGCTTCTTTGCGTTGGTGATCACATTGTCGAATTAACACCTTCTTGTCAAACATTTCCTGACGGAAGGAAGCTAGAGGTAATGACTTGCAGGCCGAGGTCAGATCTTTTTATTAATCTTCCAGCACTTCGCAAACTCGATAACATGCTTTTGGAAATATTGGACAGTTTCGTCAGTACCGAGTTTTGGTACGTTGACCAAGGCATTGTAGCCCCAGATGCAGACGGGTCAGCCTCTTTTCGCAAAGCAATGCAGAGGCAAGAGGAGAAGTGGTGGCTTCCTGTACCCCGCGTTCCCCCTGCAGGTCTCAGTGAGAACTCCAGAAAGCAATTGAACCACACACGAGAATGTGCCAACCAAATACTGAAAGCAGCCATGGCCATCAACGACAATGCTTTGGCTGAAATGGAAGTCCCCGAGTCATATTTAGAAGCTTTACCCAAGAATGGAAGAAGCTGCCTGGGGGATTTCATATACCGTTACATAACATCAGACCAATTCTCTTCGGAGTGTCTGCTTGATTGCCTAGACCTTTCCTCTGAACATGTGGCTCTGGAGATTGCTAAAAGAGTGGAAGCCTCAATTTACGTGTGGCGTAGAAGGGCTCATTCGAGACCCCCACCTAATCCTAACCGTTCGACATCAAAATCATCCTGGGAAATGGTGAAAGATTTCATGGCAGATGGAGACAAGAGAGAACTGCTAGCGGAAAGAGCTGAAAATTTTCTGCTTTCCCTGAAACAAAGGTTCCCAGGTTTAACTCAAACTACCCTCGACACCAGCAAGATCCACTGCAACAAGGATGTGGGTAAGTCCATACTGGAGAGCTACTCAAGGGTATTGGAGAGCATGGCGTTTAACATTGCGGCTCGGATCGATGATTTGCTGTATGTGGACGACTTGACTAAACAGTCAGAAAGGTTTCCCTTGGTTTCTTCGACGGTTAATGTAGTTGGCCAGCATCAGCAGCAGAAGATTTCTCGTCCATTCTCGGTGTCTGTCTCAGGCACTCCTCACAAATTAGCAGGTGTTAGTGGCACACCAAGATTTTCACCTGCACCACCTCTGGTTAGCCCTGCAAGGGGGGAGAGAACTCCTTTCCTCAACAACAATAACAGCATCAAACCTCATCGTCGTGGCTTAGGAGTGAAAAGGGTATTGTCGAATTATCTTGGGGTAGAGACGAAAGCGAAAATATGTAGCAATTCAAGTGTGGTGAATTGTTCGAACTCAAGTAGAACAGAACAGCCAGAAAAAGAGAACGGTGATGTTCGCTAG 1788 0.4597 METLSKKCETFQKKRDGVRSSGGKAAKSESFTDSSAESRETSSSGSSSSDSAEEAKAKGSSSPAPLGWPIRKATVSKCCKSDEKEDEHISHQDNSKFSRIGSKMSDTDMMKERFAKLLLGEDMSGSGKGVCTALAISNAITNLCATVFGQLWRLEPLPAEKKALWRREMEWLLCVGDHIVELTPSCQTFPDGRKLEVMTCRPRSDLFINLPALRKLDNMLLEILDSFVSTEFWYVDQGIVAPDADGSASFRKAMQRQEEKWWLPVPRVPPAGLSENSRKQLNHTRECANQILKAAMAINDNALAEMEVPESYLEALPKNGRSCLGDFIYRYITSDQFSSECLLDCLDLSSEHVALEIAKRVEASIYVWRRRAHSRPPPNPNRSTSKSSWEMVKDFMADGDKRELLAERAENFLLSLKQRFPGLTQTTLDTSKIHCNKDVGKSILESYSRVLESMAFNIAARIDDLLYVDDLTKQSERFPLVSSTVNVVGQHQQQKISRPFSVSVSGTPHKLAGVSGTPRFSPAPPLVSPARGERTPFLNNNNSIKPHRRGLGVKRVLSNYLGVETKAKICSNSSVVNCSNSSRTEQPEKENGDVR 595
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere05g0954 595 MobiDBLite consensus disorder prediction 1 69 - -
Dere05g0954 595 MobiDBLite consensus disorder prediction 25 56 - -
Dere05g0954 595 ProSiteProfiles PRONE domain profile. 97 479 IPR005512 GO:0005085
Dere05g0954 595 MobiDBLite consensus disorder prediction 574 595 - -
Dere05g0954 595 Pfam PRONE (Plant-specific Rop nucleotide exchanger) 105 473 IPR005512 GO:0005085
Dere05g0954 595 Gene3D PRONE domain, subdomain 1 99 339 - -
Dere05g0954 595 Gene3D PRONE domain, subdomain 1 340 478 - -
Dere05g0954 595 MobiDBLite consensus disorder prediction 1 22 - -
Dere05g0954 595 FunFam Rop guanine nucleotide exchange factor 1 98 338 - -
Dere05g0954 595 FunFam Rop guanine nucleotide exchange factor 14 339 478 - -
Dere05g0954 595 MobiDBLite consensus disorder prediction 82 103 - -
Dere05g0954 595 PANTHER ROP GUANINE NUCLEOTIDE EXCHANGE FACTOR 1 27 538 IPR038937 GO:0005085
Dere05g0954 595 MobiDBLite consensus disorder prediction 513 544 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere05g0954 Dere-ChrDere05 15563862 15566448 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere05g0954 05 15563862 15566448 Dere05g0954 05 15563862 15566448 CCT
Dere05g0954 05 15563862 15566448 Dere05g0954 05 15563862 15566448 ECH