Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere05g0945 ATGCTGACTGTCGCCAGTTGCATATCGGCTGAGGAGGAGGGGCAGATGAGCGTGACGCTGCTGTCGTCGCCGAGACAAGATCGAGCTTCCATGGCCATGCCGGACTTTGAGGTTAATACGCAGAAGTTGCGCGAGGATGGAGCCGCCGACATTGAAATCCCCGACACCGCTCACCAGATTAGCAGAGATTCGTGGTTTCAAGTGGGTTTTGTTCTCACCACCGGAATCAACAGCGCATATGTACTTGGATACTCCGGAACCATCATGGTTCCCCTGGGTTGGATATATGGTGTGCTTGGTTTGATTGCTGCTACTGCAATATCACTTTATGCAAATTCCCTTATTGCCAAGCTCCATGAATTTGGAGGAAAGAGGCATATTAGATACAGGGATCTTGCTGGATATGTATATGGTAGGAAAGCATATTCCCTCACATGGGCGCTGCAATATATCAATCTTTTCATGATAAATACTGGTTATATCATTTTGGCCGGTTCAGCATTAAAGGCCGTTTATGTTCTATTTAGGGATGATCATCAGATGAAGCTTCCATATTTTATCGCCATAGCTGGATTTGTGTGTGCAATGTTTGCCGTATGCACTCCCCATCTTTCAGCCCTCAGAGTTTGGCTGGGATTTTCAACAGTGTTCAGTCTTATATATATTGTTACAGCATTTGCACTGTCGCTTAAAGATGGTATGAAATCACCAGCTCGAGATTATAGCATCCCCGGTTCAACAACAAGTAAAATATTTACCACAATTGGAGCGTCTGCTAATCTTGTGTTTGCATATAATACAGGAATGCTTCCCGAGATACAGGCTACAATCAGGCAGCCCGTTGTCAAGAACATGATGAAAGCTCTGTATTTTCAATTTACCGTTGGAGTTGTGCCCCTTTATTTGGTTACTTTTACAGGCTATTGGGCTTATGGATCTTCCACCCAAACCTATTTGCTGAATAATGTGAATGGTCCAGTCTGGTTGAAGGCCACAGCCAATATTGCAGCCTTTTTGCAGTCAGTCATTGCATTGCATATATTTGCAAGTCCAATGTATGAGTATTTGGATACTAAATATGGGATCAAAGGAAGCGCGCTGGCCTTAAAGAACCTGTCATTTCGAGTTTTGGTAAGGGGTGGTTACTTGGCCTTCAATACTTTTGTGTCAGCTCTCTTGCCATTCCTTGGAGATTTCATGAGCCTCACAGGAGCTATAAGCACATTTCCACTGACATTTATACTGGCAAATCATATGTACCTAGTGGCAAAGAAGAACAAACTAACGTCCATACAAAAGCTCTGGCACTGGTTCAATGTTCTTTTCTTTGGCATCATGTCTGTTGCTGCAGCAATTGCAGCCCTACGGCTCATTGCGGTTGATTCCAAAACGTACCATCTCTTTGCTGATTTATGA 1416 0.4386 MLTVASCISAEEEGQMSVTLLSSPRQDRASMAMPDFEVNTQKLREDGAADIEIPDTAHQISRDSWFQVGFVLTTGINSAYVLGYSGTIMVPLGWIYGVLGLIAATAISLYANSLIAKLHEFGGKRHIRYRDLAGYVYGRKAYSLTWALQYINLFMINTGYIILAGSALKAVYVLFRDDHQMKLPYFIAIAGFVCAMFAVCTPHLSALRVWLGFSTVFSLIYIVTAFALSLKDGMKSPARDYSIPGSTTSKIFTTIGASANLVFAYNTGMLPEIQATIRQPVVKNMMKALYFQFTVGVVPLYLVTFTGYWAYGSSTQTYLLNNVNGPVWLKATANIAAFLQSVIALHIFASPMYEYLDTKYGIKGSALALKNLSFRVLVRGGYLAFNTFVSALLPFLGDFMSLTGAISTFPLTFILANHMYLVAKKNKLTSIQKLWHWFNVLFFGIMSVAAAIAALRLIAVDSKTYHLFADL 471
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere05g0945 471 PANTHER OS05G0424000 PROTEIN-RELATED 62 453 - -
Dere05g0945 471 Pfam Transmembrane amino acid transporter protein 62 455 IPR013057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere05g0945 Dere-ChrDere05 15413247 15416384 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere05g0945 89 471 Organic Solute Cotransporters AT2G39890 77.285 0.0 629
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere05g0945 05 15413247 15416384 Dere05g0945 05 15413247 15416384 CCT
Dere05g0945 05 15413247 15416384 Dere05g0945 05 15413247 15416384 ECH