Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere05g0941 ATGGCTCCGATCGGGCTAATCGCTCCAGCAACTGTGGCAACTCTTTCTGGCACGTACTACTATCATGCAAGCTCACTTTTTCTCTCTATGGGGTTTTCAGGTGGGGTGAGAGTGAAACAGCGGGGTGAGCTATCTGGTGTATGTTCACCCACGGGGTATGGAGTGAGAGTGGCCCCACTCTTACCCAGTTGGAGGGCGAAACGACTTTGGTGGTTGCGTTTCACTTCGTCGTCGCCACCATCATCACCGCCGTGGAGAGATGCTGCCGGTGTTGTCATGGTTTCCGAAGGAGGGGCTATTTCTCTCTCTACCAATTGGGCCATTCAAAAGAACGCATACAATTGTGCACGTGATGAGATAGTTGAATTTGTTCACCGAGCACGTGACCGAGAAAATGAAACACGCCGTGTGAAACTTGTACGTGAATCCCATTTGCTTCTTGCTATGCGCTCATCACATATTATATGCCTCAAAACCCTCCAAGAAAGGGAATCCAGAAGCAAATACACCTCCTCCAATGCTCGGATCCCTCCTCGTGCAAACCCTATAAGTCCATCCCCTTTGTATAGTTCTACTATTAACCCCTCCGCCCTAATCCCCTTCTCCTCTGTTTCCGAATTTCAGGACTCCGATCAAGACCCACCTCCCAAAATGAAGGGTCAAAGTCGTCTATTCACATTTGGGCTTGTCGCTTCCTGGTACTCCTCCAACATTGGGGTCCTCTTGCTCAACAAGTACTTGCTCAGTAATTATGGCTTCAAGTACCCGATCTTCCTCACCATGTGTCACATGACCGCTTGCTCATTGCTCAGTTACGTTGCTATAGCTTGGATGAAGATCGTGCCTATGCAGACCATTCGATCCCGCGTCCAATTCTTAAAGATCTCCGCTCTCAGTCTTGTCTTCTGCGTCTCTGTCGTCTTTGGCAACATTTCGCTTAGGTACTTGCCTGTCTCGTTCAACCAGGCAATTGGAGCCACTACGCCATTCTTCACTGCGGTTTTTGCTTACCTTATGACTTTCAAGAGGGAGGCTTGGCTCACTTATGTGACCCTTATTCCTGTTGTTACTGGGGTCATCATTGCTAGCGGGGGTGAACCAAGTTTCCATTTATTTGGGTTCATCATATGTGTTGCAGCTACAGCTGCAAGGGCCCTAAAAACAGTGTTACAAGGAATTTTACTTTCTTCTGAAGGGGAGAAGCTGAATTCTATGAACCTTCTTCTTTACATGGCTCCAATGGCAGTTGTTTTCCTTCTTCCAGCTACACTTATAATGGAAGAAAATGTGGTTGGTATCACGCTGGCTCTTGCCAGAGATGATGTCAAGATCATCTGGTATCTGCTGTTTAATTCAGCACTTGCTTATTTTGTCAACCTTACCAATTTTTTGGTCACAAAGCATACCAGTGCTCTTACCCTTCAGGTACTTGGGAATGCTAAAGGGGCTGTAGCTGTAGTGGTTTCAATTCTAATATTTAGAAACCCAGTATCAGTCACCGGAATGCTGGGTTACTCGCTCACCGTCTGTGGGGTTATACTTTACAGTGAAGCCAAAAAGCGAAGCAAGTGA 1572 0.4701 MAPIGLIAPATVATLSGTYYYHASSLFLSMGFSGGVRVKQRGELSGVCSPTGYGVRVAPLLPSWRAKRLWWLRFTSSSPPSSPPWRDAAGVVMVSEGGAISLSTNWAIQKNAYNCARDEIVEFVHRARDRENETRRVKLVRESHLLLAMRSSHIICLKTLQERESRSKYTSSNARIPPRANPISPSPLYSSTINPSALIPFSSVSEFQDSDQDPPPKMKGQSRLFTFGLVASWYSSNIGVLLLNKYLLSNYGFKYPIFLTMCHMTACSLLSYVAIAWMKIVPMQTIRSRVQFLKISALSLVFCVSVVFGNISLRYLPVSFNQAIGATTPFFTAVFAYLMTFKREAWLTYVTLIPVVTGVIIASGGEPSFHLFGFIICVAATAARALKTVLQGILLSSEGEKLNSMNLLLYMAPMAVVFLLPATLIMEENVVGITLALARDDVKIIWYLLFNSALAYFVNLTNFLVTKHTSALTLQVLGNAKGAVAVVVSILIFRNPVSVTGMLGYSLTVCGVILYSEAKKRSK 523
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere05g0941 523 PANTHER SOLUTE CARRIER FAMILY 35 227 520 - -
Dere05g0941 523 Pfam Triose-phosphate Transporter family 229 516 IPR004853 -
Dere05g0941 523 SUPERFAMILY Multidrug resistance efflux transporter EmrE 414 517 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere05g0941 Dere-ChrDere05 15388411 15394214 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere05g0941 217 523 Organic Solute Cotransporters AT3G11320 92.182 0.0 577
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere05g0941 05 15388411 15394214 Dere05g0941 05 15388411 15394214 CCT
Dere05g0941 05 15388411 15394214 Dere05g0941 05 15388411 15394214 ECH