Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere05g0919 ATGTATCTTGATAACCTCGACGCAATGTCGCATCAGAAACAAGCCGAAGAAGCCATCATCCCGAGCATGAATCAGACGATTGAACGTGATGAGAGAGAGGAAGAAGAGAAGGGGGATAGCTCTGTTTTTAGCCTAAAAAGCTTTCTCTGGCATGGCGGGTCTGCCTATGATGCCTGGTTCAGCTGTGCCTCGAATCAGGTTGCCCAAGTTCTGTTGACGCTGCCATATTCTTTCTCTCAGCTGGGAATGCTTTCGGGCATCATATTCCAAGTCTTCTATGGTCTGATGGGAAGCTGGACTGCTTATTTAATCAGCATTCTGTACATCGAGTACAGAAGCCGGAAAGAGAAAGAGAATGTCAACTTCAAAAACCACGTCATTCAGTGGTTCGAAGTGTTGGATGGCTTACTGGGTCCATATTGGAAAGCTGTCGGATTGGCTTTCAACTGTACTTTTCTCCTCCTTGGCTCCGTTATCCAGCTTATAGCCTGTGCAAGTAATATATACTACATAAATGACAAATTGGACAAGAGGACATGGACTTATATTTTTGGAGCTTGCTGTGCCACCACAGTTTTCATACCCTCATTCCACAACTACAGGATATGGTCCTTCCTTGGCCTTGGTATGACCACATACACTGCTTGGTATTTAACTATCGCGGCCCTTGTACATGGCCAAGTTGAAAATGTGAAGCACTCGGGCCCAACCAAGCTGGTTTTGTATTTCACAGGCGCCACCAACATACTGTACACTTTCGGCGGGCACGCCGTCACAGTGGAAATCATGCATGCAATGTGGAAGCCTCAGAAGTTCAAATACATCTATCTCTTGGCCACTCTCTATGTCTTCACCCTCACGCTACCATCTGCATCTGCCGTCTACTGGGCCTTCGGTGACCTACTCCTTGACCACTCCAATGCCTTCTCGCTTCTCCCTCGCTCCGGCTGGCGTGACACCGGCGTCATTCTAATGCTCATTCATCAGTTCATAACATTTGGGTTTGCTTGTACGCCACTGTATTTTGTGTGGGAGAAAGTGATAGGAATGCATGACACAAAGAGCATATGTTTGAGGGCTCTTGCAAGGCTGCCCGTGGTGATACCCATATGGTTCTTGGCCATTATTTTTCCCTTCTTTGGCCCCATAAACTCCGCTGTGGGGGCTCTTCTGGTCAGCTTCACCGTCTATATTATCCCTTCTATGGCCCATATGCTCACTTTCAGGTCTGCCTCAGCACGACAGAATGCAGCAGAAAAACTTCCCTCCTTCATTCCAAATTGGACGGCGATGTATGTGGTGAATGCGTTCGTGGTAGTGTGGGTTCTGGTCGTAGGGTTTGGATTTGGAGGGTGGGCTAGCATGGCTAATTTCATCAAGCAGGTTGATACATTCGGGCTATTTGCCAAGTGCTATCAGTGCCCTCCCAAACTGCCTCCTTCCAATCACACAGCACATCACTGA 1464 0.4781 MYLDNLDAMSHQKQAEEAIIPSMNQTIERDEREEEEKGDSSVFSLKSFLWHGGSAYDAWFSCASNQVAQVLLTLPYSFSQLGMLSGIIFQVFYGLMGSWTAYLISILYIEYRSRKEKENVNFKNHVIQWFEVLDGLLGPYWKAVGLAFNCTFLLLGSVIQLIACASNIYYINDKLDKRTWTYIFGACCATTVFIPSFHNYRIWSFLGLGMTTYTAWYLTIAALVHGQVENVKHSGPTKLVLYFTGATNILYTFGGHAVTVEIMHAMWKPQKFKYIYLLATLYVFTLTLPSASAVYWAFGDLLLDHSNAFSLLPRSGWRDTGVILMLIHQFITFGFACTPLYFVWEKVIGMHDTKSICLRALARLPVVIPIWFLAIIFPFFGPINSAVGALLVSFTVYIIPSMAHMLTFRSASARQNAAEKLPSFIPNWTAMYVVNAFVVVWVLVVGFGFGGWASMANFIKQVDTFGLFAKCYQCPPKLPPSNHTAHH 487
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere05g0919 487 PANTHER OS05G0424000 PROTEIN-RELATED 57 435 - -
Dere05g0919 487 Pfam Transmembrane amino acid transporter protein 51 444 IPR013057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere05g0919 Dere-ChrDere05 14989425 14993615 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere05g0919 9 474 Organic Solute Cotransporters AT2G21050 77.897 0.0 771
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere05g0919 05 14989425 14993615 Dere05g0919 05 14989425 14993615 CCT
Dere05g0919 05 14989425 14993615 Dere05g0919 05 14989425 14993615 ECH