Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere05g0855 ATGGAGGCTCTCAAGAGCATTGACATCTCATCCATTTTCTTAGCCATTTTGGTTCTTCTAGCTTCTGCATTGTCTTCAGCAAATGCCAAAGTTCATGAGCACGAGTTTGTCGTTCAAGCAAGTCCAGTGAAGAGGCTGTGCAAAACCCACAACACCATCACTGTCAATGGCCAATTCCCTGGCCCAACCTTGGAGGTCAATAACGGAGACACTTTGGTCGTCAAAGTCACTAACAAAGCTCGTTATAACGTCACCATCCACTGGCATGGGGTTCGGCAAATGAGAACTGGGTGGGCAGATGGACCAGAGTTTGTGACACAGTGCCCTATTCGACCTGGAGGAAGCTACACCTACCGTTTCACCATTCAAGGTCAAGAAGGCACACTGTGGTGGCATGCTCATAGCTCGTGGCTTAGAGCCACAGTTTATGGAGCTCTCATCATTCGTCCAAGGGAAGGTGAACCCTACCCTTTCCCTAAGCCGATGCGCGAGACACCTATTCTTCTAGGGGAATGGTGGGACATAAACCCCATTGATGTTTTGAGGCAGGCCACTCGAACTGGAGCGGCTCCCAACGTGTCCGATACTTACACTATCAATGGTCAACCTGGTGATCTTTACAAGTGCTCTAGCAAAGACACCACCATTGTTCCAATAGACTCCGGCGAGACCAATCTCCTCCGAGTTATCAACGCTGCACTCAATCAACCCCTTTTCTTCACCGTCGCCAACCACAAGCTCACGGTGGTCGGGGCCGATGCCTCCTACATGAAGCCCTTCACCACCACCGTCCTCATGCTTGGACCCGGCCAAACCACCGACGTCCTCATCAGCGGCGACCAACCCGCTTCCCGCTACTACATGGCGGCGCGTGCTTACCAGTCCGCTCAAAACGCACCGTTCGACAAAACCACCACCACCGCCATCCTCGAATACAAATCCGCCACGTGTCCCTCAAAAGGAGCCTGCTCCAACATCAAACCCGTGATGCCCCCACTCCCCGCCTACAACGACACCAACACCGTCACCGCCTTCAGCAGCAAATTCCGAAGTCCAAAAAGAGCCGAAGTGCCCTCAGAAGTCGACGAGAGCCTCTTCTTCACTGTGGGCCTTGGGCTCAACAAGTGCCCGCCCAATTTCAGAAAAAGGCGATGCCAGGGGCCCAATGGGACCCGATTCACTGCGAGCATGAATAACGTCTCTTTCGTGCTCCCCAGAAACATTTCCATCCTGCAAGCCCATCAGCTCGGAATCCCGGGAGTGTTCACCACCGATTTTCCCGCCAAGCCGCCGGTGAAGTTCGATTACACCGGCAACGTCAGCCGCTCGCTCTGGCAACCCGTTCCCGGGACGAAGGTGTACAAGCTCAAGTACGGATCGAGGGTTCAGGTTGTTTTGCAGGACACCAGCATTGTGACCCCGGAGAACCACCCCATTCATCTTCATGGGTATGATTTCTTCATCGTAGCAGAGGGTTTCGGGAATTTCGACCCCAAGAAAGATACTGCGAAATTCAACCTTATTGATCCGCCTATGAGGAACACAGTGGCTGTTCCTGTAAATGGATGGGCGGTTATTCGATTTGTTGCTGATAACCCAGGTGCTTGGATTATGCATTGCCATTTGGATGTTCATATCAACTGGGGTTTGGCCACGGTGTTCTTGGTAGGGAATGGAGTTGGGAAACTGCAATCCATAGAGCCTCCTCCGGCAGATCTGCCTCTCTGTTAG 1731 0.5269 MEALKSIDISSIFLAILVLLASALSSANAKVHEHEFVVQASPVKRLCKTHNTITVNGQFPGPTLEVNNGDTLVVKVTNKARYNVTIHWHGVRQMRTGWADGPEFVTQCPIRPGGSYTYRFTIQGQEGTLWWHAHSSWLRATVYGALIIRPREGEPYPFPKPMRETPILLGEWWDINPIDVLRQATRTGAAPNVSDTYTINGQPGDLYKCSSKDTTIVPIDSGETNLLRVINAALNQPLFFTVANHKLTVVGADASYMKPFTTTVLMLGPGQTTDVLISGDQPASRYYMAARAYQSAQNAPFDKTTTTAILEYKSATCPSKGACSNIKPVMPPLPAYNDTNTVTAFSSKFRSPKRAEVPSEVDESLFFTVGLGLNKCPPNFRKRRCQGPNGTRFTASMNNVSFVLPRNISILQAHQLGIPGVFTTDFPAKPPVKFDYTGNVSRSLWQPVPGTKVYKLKYGSRVQVVLQDTSIVTPENHPIHLHGYDFFIVAEGFGNFDPKKDTAKFNLIDPPMRNTVAVPVNGWAVIRFVADNPGAWIMHCHLDVHINWGLATVFLVGNGVGKLQSIEPPPADLPLC 576
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere05g0855 576 ProSitePatterns Multicopper oxidases signature 1. 534 554 IPR033138 -
Dere05g0855 576 Gene3D - 162 355 IPR008972 -
Dere05g0855 576 FunFam Laccase 162 355 - -
Dere05g0855 576 Pfam Multicopper oxidase 426 558 IPR011706 GO:0005507|GO:0016491
Dere05g0855 576 SUPERFAMILY Cupredoxins 356 576 IPR008972 -
Dere05g0855 576 Pfam Multicopper oxidase 164 314 IPR001117 -
Dere05g0855 576 Gene3D - 19 150 IPR008972 -
Dere05g0855 576 SUPERFAMILY Cupredoxins 28 177 IPR008972 -
Dere05g0855 576 SUPERFAMILY Cupredoxins 158 352 IPR008972 -
Dere05g0855 576 Gene3D - 381 576 IPR008972 -
Dere05g0855 576 ProSitePatterns Multicopper oxidases signature 2. 539 550 IPR002355 GO:0005507
Dere05g0855 576 PANTHER MULTI-COPPER OXIDASE 31 560 IPR045087 -
Dere05g0855 576 CDD CuRO_1_LCC_plant 34 150 IPR034288 GO:0005507
Dere05g0855 576 FunFam Laccase 20 150 - -
Dere05g0855 576 CDD CuRO_2_LCC_plant 166 312 IPR034285 -
Dere05g0855 576 CDD CuRO_3_LCC_plant 421 559 IPR034289 GO:0005507
Dere05g0855 576 Pfam Multicopper oxidase 38 152 IPR011707 GO:0005507
Dere05g0855 576 NCBIfam laccase 29 576 IPR017761 GO:0046274|GO:0048046|GO:0052716
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere05g0855 Dere-ChrDere05 14109614 14112430 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere05g0855 05 14109614 14112430 Dere05g0855 05 14109614 14112430 CCT