Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere05g0845 ATGAAGCCCCACACTCAGGCTGCCTGTGGCAGTGGACCGCCACGTATGAACGCTTTCCGGCGTGGTACGGCCTCTTATGCTCCGCCGGAGAATCTTCTTCCGCCGTTATTCGATGCCGCAAACCATGCTTACCGGAGATTTTGGACCAGGAAACGCCGCCGTATGATCAATTTATCCACTCGCCCGTCTCGCATCAAGGCTAGTAAATCTGACCACTTGGACCATAGTGACAAAATAGAAAATTTAGCTCGACATTTCAAGTCATCGGATGAGGCTCGAAGCACCAGACGAAAAGTGTTGGTCGCGCCATTTCTGGCCGTGGGCGCGTCATTTCTGCTCTCGGCGGCAACCAGGGCGGAGGATCAAGTGCCGGTTGCTGCGACGCCGTCGTCGATGGGGGGGGAAACAGCAGTGGATTTGCCAGCTTCCAAGCCTGAGGAGCAGAAGGAGGAGGAGTATGTGGTAACATCAAGGATTTACGATGCGACGGTTATCGGGGAGCCATTTGCAATTGGGAAAGATAAATCAAAGGTGTGGGAGAAATTGATGAATGCTCGAGTAGTGTATTTGGGGGAAGCGGAGCAGGTTCCAATTCGAGATGATAAGGAATTGGAGCTGGAGATAGTGAAGAATTTGCACAAGCGATGCGTCGAGAGCGAAAAGCGATTATCTTTGGCTCTTGAAGCTTTTCCATCTAATCTACAGGAGCAGCTCAATCAATATATGGATAAAAAGATAGATGGAGAAACCTTAAAGTCTTATACATTACATTGGCCACCTCAACGATGGCAGGAGTATGAACCGCTACTTAGCTACTGTCGTGATAATGAAATTCATCTTGTTGCTTGTGGTACCCCTCTTAAGGTCTTAAGGACTGTCCAAGCAGATGGAATTGCTGGGCTTTCAAAGGCTGATCGTAAAACATATGCTCCTCCAGCTGGTTCAGGCTTCATATCAGGCTTTACTTCTATCTCACGTAGATCACCAGTAGATATTATGAGTAATCCAAATCCATCTGTTCCTTTTGGTCCAAGCTCATATCTATCTGCACAGGCAAGAGTAGTTGAGGATTACACTATGTCCCGCACCATCTTACAAAATGTGCAGCAGGGAGGAGCTACTGGTATGTTAGTTGTTGTCACTGGTGCTAGCCATGTTGCATATGGATCTAGAGGAACTGGAGTGCCAGCAAGAATTTCAAGAAAATTGCAGAAGAAAAATCAAGTTGTTATATTACTTGATCCTGAACGGCAACTCATTCGTAGGGAGGGAGAAGTTCACATTGCTGATTTCTTGTGGTATTCTGCTGCCAGACCATGTAGCAGAAATTGCTTTGATCGTGCTGAGGTTGCTCGGGTTATGAATGCTGCTGGTCGGAGGAGAGATGCCCTCCCACAGGATCTTCAAAAGGGAATTGATCTTGGTTTGGTATCACCTGAGTTGTTACAGAACTTTTTTGATCTAGAGCAGTATCCACTGATTTCAGAACTCACTCACCGATTCCAGGGATTTAGGGAACGATTGTTGGCTGATCCTAAATTCTTGCATAGATTAGCCATAGAGGAAACTATATCAATAACAACTACATTATTAGCACAGTATGAAAAGCGGAAGGAAAATTTTTTTGAAGAGCTTGACTATGTTATTACAGACGCAGTCAGAGGAATAGTTGTTGATTTCTTTACAGTATGGCTTCCTGCCCCAACTGTGTCATTCCTTTCATATGCTGATGAGATGAATGCACCTGACAACATGGATGCTTTGAGAGATCTTCTTGGTTCCATCCCAGACAATGCATTTCAAAAGAGTCCTGTTGGGACAAACTGGAATCTCAATCATAGAGTTGCATCTGTTGTATTTGGTGGTTTAAAACTTGCCGGTGTTGGATTTATCTCAAGTATAGGAGCTGTGGCTTCATCAAATGCACTGTTTGCAATTCGTAGATTCTTTAATCCAGCAGTTATATCTAGTCAACAGATTAGAAGATCACCAATACTCAAAACAGCAGTTGTTTGTGCATGTTTTCTCGGAATATCTGCAAATCTTCGTTATCAGATTATTGCTGGAGTTGTGGAGCATCGGCTTTCGGAACAGTTTTCATCCCAAACATTACTTGTAAATGTGATATCTTTTGTTGCTCGGATAATCAATTCTTATTGGGGAACTCAGCAATGGATTGACATTGCACGGTCTACTGGACTGCAAGTTAAAAAGACTGCATCACCTTCCCAACAAACACCAGATTCTCTGAATCATGCTGCAATTGTCTGCAATGAAACAGAAGAAGCCAATGCCGATGAAATACAAAGTAAATGA 2316 0.4417 MKPHTQAACGSGPPRMNAFRRGTASYAPPENLLPPLFDAANHAYRRFWTRKRRRMINLSTRPSRIKASKSDHLDHSDKIENLARHFKSSDEARSTRRKVLVAPFLAVGASFLLSAATRAEDQVPVAATPSSMGGETAVDLPASKPEEQKEEEYVVTSRIYDATVIGEPFAIGKDKSKVWEKLMNARVVYLGEAEQVPIRDDKELELEIVKNLHKRCVESEKRLSLALEAFPSNLQEQLNQYMDKKIDGETLKSYTLHWPPQRWQEYEPLLSYCRDNEIHLVACGTPLKVLRTVQADGIAGLSKADRKTYAPPAGSGFISGFTSISRRSPVDIMSNPNPSVPFGPSSYLSAQARVVEDYTMSRTILQNVQQGGATGMLVVVTGASHVAYGSRGTGVPARISRKLQKKNQVVILLDPERQLIRREGEVHIADFLWYSAARPCSRNCFDRAEVARVMNAAGRRRDALPQDLQKGIDLGLVSPELLQNFFDLEQYPLISELTHRFQGFRERLLADPKFLHRLAIEETISITTTLLAQYEKRKENFFEELDYVITDAVRGIVVDFFTVWLPAPTVSFLSYADEMNAPDNMDALRDLLGSIPDNAFQKSPVGTNWNLNHRVASVVFGGLKLAGVGFISSIGAVASSNALFAIRRFFNPAVISSQQIRRSPILKTAVVCACFLGISANLRYQIIAGVVEHRLSEQFSSQTLLVNVISFVARIINSYWGTQQWIDIARSTGLQVKKTASPSQQTPDSLNHAAIVCNETEEANADEIQSK 771
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere05g0845 771 CDD ChanN-like 186 412 IPR007314 -
Dere05g0845 771 Gene3D - 171 438 - -
Dere05g0845 771 SUPERFAMILY EreA/ChaN-like 176 435 - -
Dere05g0845 771 Pfam Protein RETICULATA-related 506 690 IPR021825 -
Dere05g0845 771 PANTHER PROTEIN RETICULATA-RELATED 2, CHLOROPLASTIC-RELATED 56 769 - -
Dere05g0845 771 MobiDBLite consensus disorder prediction 127 147 - -
Dere05g0845 771 Pfam Haem-binding uptake, Tiki superfamily, ChaN 178 399 IPR007314 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere05g0845 Dere-ChrDere05 13998599 14004401 Dispersed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere05g0845 05 13998599 14004401 Dere05g0845 05 13998599 14004401 ECH