Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere05g0840 ATGGTTTCAATTGATAATAGTAATCCCAAAGATGAAATCGAGGAAATAAATGACATTAAAGTAAAGGATTTAGCAGCAATTGAACTTTCAGCCTCTCCAGGGACCACTATAAACAGTGAAAATCCTCTGAGAAAGTTTCAAAACACCTTGAGCTCTCTTCCTAACAGGATTAAGTTCCTCAAGTCCGGGTCTGCATTTGCAAAATCCATGACTGATAGAAACCAGATTTCACAATCTCGGCCTTCTCCTGGTTCATCTGGCTTCAGGAAACGCTTCAGTGGCATGTTTGCACATAAACTTGACTGGGTTTCCCTCAAGAATATGTACAAAGAATGGATCAGAAATCCAATGAACATGGCCCTTTTCGCGTGGATCACCTGCGTTGCTGTTTCAGGTGCAATTCTCTTCCTTGTCATGACTGGAATGTTGAACAGTGTGCTTCCAAAGAAGTCTCAGAGAAACACATGGTTTGAAATTAACAACCAAATACTCAATGCACTGTTTACTCTTATGTGTTTATACCATCACCCCAAAAGATTCTATCATCTTGTACTTCTGTACAGATGGAGACATAATGATATCTTCATACTTCGAAAGGTGTACTGCAAGAATGGGACTTATAAGCCACATGAATGGGCACATATATTGGTAGTGGTTATTCTCCTTCATGTGAATTGTTTTGCTCAATACGCACTTTGTGGACTAAACTTAGGGTACAAAAGATCTGAGAGACCTGCCGTAGGAGTTGGAATTTGTATATCTGTTGCAATAGCTGCACCTGCAGTTGCTGGTCTTTATACCATTCTTAGTCCTCTTGGTAGGGATTATGATTCTGAGATGGATGAAGAAGCACAGGTTCAAACCACTGCCTCTCAAAAGCCACTGGAGAAAAGATATTCATTTGCAACAAGAGATGGACATATGGTGTTTGAGAATCGACCACAGTGGAGGGGAGGAATACTTGACATTTGGGAGGATATCTCTATTTCATATCTCTCACTTTTCTGCACTTTTTGTGTGTTTGGGAGGAACATGGAGAGACTTGGTCTTGGGAACATGTACGTTCATATTGCAACTTTTATCCTGTTCTGTACGGCTCCCTTCTGGATTTTTTTCTTGGCTGCTGTTAATATTGATGATGACAATGTCAGACAGGCTCTAGAAGCTATTGGAATTGTTCTTTGTTTCTTTGGTTTGCTGTATGGTGGCTTTTGGAGGATCCAAATGAGGGAGAGGTTCAATTTGCCTGCTTATTCCTTCTGTTTTGGTGAACCCTCAATATCTGACTGCACAGTTTGGCTCTGCTGTTGCTGGTGCTCTCTTGCTCAGGAGGCAAGGACTGGGAATTCCTATGAAGTTGTAGAAGATAAATTCTGCAGGAAACAAGTAGATATTGGTGAGCAGCTTCTAATATCACCTTTGCCTCGTGAAGATGGAGTATTGATCACTTCTGACACAAGTTCTTCTCTGGGCAACAACTCTTCCCCTTCCAATGCCATAACATCCAGATCTTTAAGTTCACATATGCCTCTATCAATTGTAACAGAAAAGTCTTCTGAAATAGGTCAAGATGGAACAATGAGCCTACCAGCTCCAGCATTTATACGAAGAGATCTCTAG 1620 0.4099 MVSIDNSNPKDEIEEINDIKVKDLAAIELSASPGTTINSENPLRKFQNTLSSLPNRIKFLKSGSAFAKSMTDRNQISQSRPSPGSSGFRKRFSGMFAHKLDWVSLKNMYKEWIRNPMNMALFAWITCVAVSGAILFLVMTGMLNSVLPKKSQRNTWFEINNQILNALFTLMCLYHHPKRFYHLVLLYRWRHNDIFILRKVYCKNGTYKPHEWAHILVVVILLHVNCFAQYALCGLNLGYKRSERPAVGVGICISVAIAAPAVAGLYTILSPLGRDYDSEMDEEAQVQTTASQKPLEKRYSFATRDGHMVFENRPQWRGGILDIWEDISISYLSLFCTFCVFGRNMERLGLGNMYVHIATFILFCTAPFWIFFLAAVNIDDDNVRQALEAIGIVLCFFGLLYGGFWRIQMRERFNLPAYSFCFGEPSISDCTVWLCCCWCSLAQEARTGNSYEVVEDKFCRKQVDIGEQLLISPLPREDGVLITSDTSSSLGNNSSPSNAITSRSLSSHMPLSIVTEKSSEIGQDGTMSLPAPAFIRRDL 539
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere05g0840 539 PANTHER PLAC8 FAMILY PROTEIN-RELATED 3 537 - -
Dere05g0840 539 Pfam Protein of unknown function (DUF2985) 111 189 IPR021369 -
Dere05g0840 539 NCBIfam uncharacterized Cys-rich domain 315 447 IPR006461 -
Dere05g0840 539 Pfam PLAC8 family 316 446 IPR006461 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere05g0840 Dere-ChrDere05 13970882 13972501 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere05g0840 05 13970882 13972501 Dere05g0840 05 13970882 13972501 CCT
Dere05g0840 05 13970882 13972501 Dere05g0840 05 13970882 13972501 ECH