Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere05g0122 ATGAACAACTTTGACTCTTATCCTCCCGCTCTCCGCCACCTCAACCACCACCGCCATGAAGACGACGGCGACGACCACCGTCGTGACCAGGAACCAAATGAATCCTTTGACCGGAACCATCTCGATTCGGATCCTGTGCCTGTGATAGATCTCCAATGCTTGAACCAAGAGAACGAGAAGCTCGAGGAGGCTTGCAGGGAGTGGGGGCTATTCCGTTTGGTCAACCATGGAGTTCCGCTATCCCTATTGACCCAACTTCATCACCTTTCCAAACAGCTACTTTGCATGCCCTTTGAGTCCAAACAAGCCTCCTGTGAAGGTAGCCCTATGAGCTACTTTTGGGGCACCCCTGCCCTAACGCCATCTGGGGCTGCCCTATCGGGAGGCCCTCAGAAGATCAATTTGGTTGAAGGGTTCAATGCTCCTTTGGCCCAGCTCTCGCAGTTCCACCCTCAGCTTCCTCTGCTTGAGTCCTTCAGAGATGTGCTAGTGGAGTATGGAAAGCACTTGTGGAGAATTGCAACCACATTATTCGAAGGAATGATGAAGAGGGTGGAGGTTGTGAAGAAGGAGAAGTGGAGGTGGTACCTCTCAGAGAAGACAGGGAATGTGCGAGTGTATCGGTACCCACATAGCCCTAATGCTAGCAAGGGAGGGTGGGGAATGGAGGCTCATACAGATAGCTCAGTGCTGTCCATTCTTAACCACCTTGACGAACAAGTGTGTGGATTTGAGGTCCTCAAGGATCACCAATGGCTCTCCGTCAAACCCACTCCCAACACTTTCATAGTCAACCTTGGTGACATGATGCAGGCGATAAGTGATGACAGATACAAGAGCGCGACACACAGAGTGAAGATCAACCGAGAGAGAGACAGATTCTCAGTGTGTTACTTCGTGTTCCCCGATGAAGAAGCTGTGATAGACAGCTCCAACTACAAGCCCTTCAGTTACAATGATTTCAGAGACCAAGTTCAGCGAGACGTGAAGTCCACTGGATACAAAGTGGGCCTTCCGAGGTTTAGACACATTGCTCATCATTCCTAG 1047 0.5072 MNNFDSYPPALRHLNHHRHEDDGDDHRRDQEPNESFDRNHLDSDPVPVIDLQCLNQENEKLEEACREWGLFRLVNHGVPLSLLTQLHHLSKQLLCMPFESKQASCEGSPMSYFWGTPALTPSGAALSGGPQKINLVEGFNAPLAQLSQFHPQLPLLESFRDVLVEYGKHLWRIATTLFEGMMKRVEVVKKEKWRWYLSEKTGNVRVYRYPHSPNASKGGWGMEAHTDSSVLSILNHLDEQVCGFEVLKDHQWLSVKPTPNTFIVNLGDMMQAISDDRYKSATHRVKINRERDRFSVCYFVFPDEEAVIDSSNYKPFSYNDFRDQVQRDVKSTGYKVGLPRFRHIAHHS 348
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere05g0122 348 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 200 302 IPR005123 -
Dere05g0122 348 PRINTS Isopenicillin N synthase signature 61 78 - -
Dere05g0122 348 PRINTS Isopenicillin N synthase signature 262 288 - -
Dere05g0122 348 Gene3D - 14 330 IPR027443 -
Dere05g0122 348 MobiDBLite consensus disorder prediction 11 43 - -
Dere05g0122 348 MobiDBLite consensus disorder prediction 1 43 - -
Dere05g0122 348 PANTHER 2-OXOGLUTARATE (2OG) AND FE(II)-DEPENDENT OXYGENASE SUPERFAMILY PROTEIN-RELATED 46 324 - -
Dere05g0122 348 SUPERFAMILY Clavaminate synthase-like 38 327 - -
Dere05g0122 348 Pfam non-haem dioxygenase in morphine synthesis N-terminal 46 112 IPR026992 -
Dere05g0122 348 Pfam 2OG-Fe(II) oxygenase superfamily 204 302 IPR044861 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere05g0122 Dere-ChrDere05 1625522 1632912 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere05g0122 46 346 Glycosyltransferase AT5G59530 25.532 2.51e-25 103
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere05g0122 05 1625522 1632912 Dere05g0122 05 1625522 1632912 ECH