Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere04g2161 ATGACCCGGGTCGAGAAAGCATTTGTTCTCTTCTTCTTCTTCGGTAATTCAGGATTAGGCAACGAAATTATTCAAAGCAGAAAGAAGAAATATCGCGCAATTCTGCTTCAATTGAGCAGAAACAACAAAAGAATATGCAAAACTGATATGGGTGATTTGGGAAGGCGAAGAATTCAGTTGAGTAATCTAATCAATGTCTTGCCGTGCTCTTCCGGCGTTTTACGCAGGGCTTGCTTACCCATGGAACTCCAACTGATTCTAACTGTCGTCTTCGTCGTCGCTTCTGCAACCGTCGCCGCCGATTACATCCACCCTTTGCCTCGTGAAACCCTTCAATTTCCATGGGATTCGAAGTCCGCCTCCTACCCCCAACAGGTGCACATTTCTTTGGCAGAAGACAAGCACATGAGAGTTAGCTGGGTAGCTGATGATGATTCATCACCTTCAATTGTAGAATATGGAACGATACCTGGGAGATATGACAATTTAGCCGAAGGAGACAGCACATCTTATACTTATCTGTTCTATAGCTCAGGAAAGATACACCACACTGTAATTGGGCCCTTGGAGGATAGTACTGTGTACTTTTATCGGTGTGGTGGACAAGGTCCTGAGTTCCAGCTTAAAACTCCTCCTGCTCAATTACCAATTACTTTTGCTGTGGCTGGGGATCTGGGTCAAACTGGTTGGACTAAATCAACATTAGATCACATTGGCCAATGCAATTATGATGTCCACCTGCTTCCGGGAGACCTTTCATATGCCGATTATATCCAAAGTCGATGGGACACATTTGGCAGGCTTGTGCAGCCCCTTGCTAGCACAAGACCATGGATGGTAACACAAGGGAACCATGAAAAAGAGAGCATACCGCTGCTGAAGGATGGATTTGAATCATATAATGCCAGATGGAAGATGCCATTTGAGGAGAGCGGGTCAACTTCAAATCTTTATTATTCTTTTGAAGTTGCAGGTGTTCATATTATCATGCTTGGTTCCTATACAGATTACGATGAGTACTCAGAACAATATAGATGGTTGAAGATGGATCTGTTAAAGGTAAACAGGGAAAGGACGCCTTGGCTGATTGTACTATTTCATGTGCCGTGGTATAATAGTAATAGGGCTCATCACGGTGAAGGGAATGATATGATGGCAGCTATAGAGCCGTTACTATATGCTGCTAGTGTTGATTTAGTACTTGCTGGTCATGTGCATGCTTATGAACGCTCGAAACGTGTGAATAATGGAAGATCAGACCCATGTGGTGCTGTCCATATAACTATTGGTGATGGAGGAAATAGAGAAGGCTTAGCCCATAAGTATATAAACCCGCAACCAGAGTGGTCAGAATTCCGGGAAGCCAGTTTCGGTCATGGTGAGCTCAAGATAGTAAATGCCTCTCATGCCTTCTGGAGTTGGCACAGGAACGATGATGATGAGCCAGTAAAATCCGATGATATCTGGATAACCTCCTTGGTAAGCTCAGGATGTGTTGATCAGAAGAGACATGAACTCAGAAATATACTTATGACACCTTAA 1542 0.4377 MTRVEKAFVLFFFFGNSGLGNEIIQSRKKKYRAILLQLSRNNKRICKTDMGDLGRRRIQLSNLINVLPCSSGVLRRACLPMELQLILTVVFVVASATVAADYIHPLPRETLQFPWDSKSASYPQQVHISLAEDKHMRVSWVADDDSSPSIVEYGTIPGRYDNLAEGDSTSYTYLFYSSGKIHHTVIGPLEDSTVYFYRCGGQGPEFQLKTPPAQLPITFAVAGDLGQTGWTKSTLDHIGQCNYDVHLLPGDLSYADYIQSRWDTFGRLVQPLASTRPWMVTQGNHEKESIPLLKDGFESYNARWKMPFEESGSTSNLYYSFEVAGVHIIMLGSYTDYDEYSEQYRWLKMDLLKVNRERTPWLIVLFHVPWYNSNRAHHGEGNDMMAAIEPLLYAASVDLVLAGHVHAYERSKRVNNGRSDPCGAVHITIGDGGNREGLAHKYINPQPEWSEFREASFGHGELKIVNASHAFWSWHRNDDDEPVKSDDIWITSLVSSGCVDQKRHELRNILMTP 513
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere04g2161 513 Gene3D - 122 213 - -
Dere04g2161 513 Pfam Iron/zinc purple acid phosphatase-like protein C 424 480 IPR025733 -
Dere04g2161 513 Pfam Purple acid Phosphatase, N-terminal domain 123 203 IPR015914 GO:0003993|GO:0046872
Dere04g2161 513 CDD MPP_PAPs 216 492 IPR041792 -
Dere04g2161 513 SUPERFAMILY Purple acid phosphatase, N-terminal domain 113 212 IPR008963 GO:0003993|GO:0046872
Dere04g2161 513 PANTHER ACID PHOSPHATASE RELATED 88 491 IPR039331 GO:0003993
Dere04g2161 513 Pfam Calcineurin-like phosphoesterase 218 408 IPR004843 GO:0016787
Dere04g2161 513 SUPERFAMILY Metallo-dependent phosphatases 216 483 IPR029052 -
Dere04g2161 513 Gene3D - 214 500 IPR029052 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere04g2161 Dere-ChrDere04 24770726 24780250 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere04g2161 123 503 Miscellaneous Gene Families AT2G03450 27.033 9.12e-30 121
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere04g2161 04 24770726 24780250 Dere04g2161 04 24770726 24780250 ECH