Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere04g2158 ATGATTCACAAATACTACGGCATAAGCATAAGCAGCAGATTGACTTCAACGGTTTTCCTTCGGATTGCCTTAGCTGGTTTCCACAAGATTTTCTCCAAGTTAGATTTGGATATAACGGGAAGCAAAAGTACAGCTGGAATTTATGGGTTACAGTTTTGTTCATTTGATTTCTTGGAAAATGAAATGTTCATGGAGAACAGTGGAAGTAGTGCCTTTTTGAGGAATAGAAGGTTGGAGAGCTTTTTGAACACAACCTCTGGCCAGAGGGTGGAGAAGATACCTAAAGTTACAGCGAAAGATGAATCAGAGAGGCAGCCGAGGACCGACATATTTACAGATGACGATGATGATGGGTGGTTGTTAAATATTATATCATGGATTAAAATTGTCGTATGTTTTGTGTCTATGATGGTTACAACATTTATATGGACATTGATCATGCTTATTCTAATACCATGGCCCTATGAGAGGATTAGGCAAGGAAACATTTATGGGCATGTGACTGGTAGAATGCTGATGTGGATTCTTGGCAATCCTGTGATGATTGAAGGTTCTGAGTATTCTAACAAGAGGGCCATTTACATCAGTAATCATGCATCTCCGATAGATATATTTCTTATCATGTGGTTGACTCCAACAGGCACTGTTGGAATTGCGAAGAAGGAGATAATATGGTATCCTTTATTTGGTCAACTTTATGTTTTAGCTAACCATCTTCGTATAGACCGATCAAATCCAACTACTGCTATCAAGTCCCTGAAAGAGGCAGCTCGTGCAGTCGTGAAAAACAACCTGTCTCTGATAATTTTTCCAGAGGGCACAAGGTCCAAAAATGGACGGCTACTTCCTTTCAAAAAGGGTTTTGTTCATCTGGCAATACAATCATGCCTTCCTATCGTTCCGATGGTCCTAACAGGTACTCATCGGGCATGGAGGAAAGGCAGTTTACATGTTCGTCCAGCACCTCTAGCTGTCAAGTATCTTCCCCCAATAAGTACTGAAAATTGGACGGCTGATAATATTGACGACTACGTCAAAATGGTACATAGCCTGTATGCTGAACACCTTCCAGAGACTCAGAGACCTTTGCCTTGA 1095 0.4091 MIHKYYGISISSRLTSTVFLRIALAGFHKIFSKLDLDITGSKSTAGIYGLQFCSFDFLENEMFMENSGSSAFLRNRRLESFLNTTSGQRVEKIPKVTAKDESERQPRTDIFTDDDDDGWLLNIISWIKIVVCFVSMMVTTFIWTLIMLILIPWPYERIRQGNIYGHVTGRMLMWILGNPVMIEGSEYSNKRAIYISNHASPIDIFLIMWLTPTGTVGIAKKEIIWYPLFGQLYVLANHLRIDRSNPTTAIKSLKEAARAVVKNNLSLIIFPEGTRSKNGRLLPFKKGFVHLAIQSCLPIVPMVLTGTHRAWRKGSLHVRPAPLAVKYLPPISTENWTADNIDDYVKMVHSLYAEHLPETQRPLP 364
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere04g2158 364 SUPERFAMILY Glycerol-3-phosphate (1)-acyltransferase 128 359 - -
Dere04g2158 364 Pfam Acyltransferase 182 304 IPR002123 GO:0016746
Dere04g2158 364 NCBIfam 1-acylglycerol-3-phosphate O-acyltransferase 188 304 IPR004552 GO:0003841|GO:0008654|GO:0016020
Dere04g2158 364 SMART plsc_2 192 307 IPR002123 GO:0016746
Dere04g2158 364 CDD LPLAT_AGPAT-like 170 342 - -
Dere04g2158 364 PANTHER 1-ACYL-SN-GLYCEROL-3-PHOSPHATE ACYLTRANSFERASE 127 360 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere04g2158 Dere-ChrDere04 24750687 24754687 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere04g2158 129 315 Acyl Lipid Metabolism Gene Families AT4G30580 30.964 1.76e-17 80.9
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere04g2158 04 24750687 24754687 Dere04g2158 04 24750687 24754687 ECH