Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere04g2149 ATGCTGGAAATTCTGCTTTTTCTTGCTTTCTTTCTTTCTTTCTGTGGGCTGAGATGGGTGACTACAATGAATGAGTGTGGTCACGGATACAGAGCCGAGCTGAGCTACGCTGAGCAGGTCGGGACGCAGGCAGAGAGTGACAAAGAAACACAGAAGATTGACGGCGACATGGCATGGTGTGTTGCCAACTCCTTCCACGCGCCGGCGGTGCACGTCGGCGTGTTGCGCAACCGCTCTCAGTTTTCCGCCGGCATTGGCAGTGTCTCTGTTGCCGGCACCACCTCGCGCCGTTCCTCTTCTTCCAAGCGCTCTGTGCCCTTCTCTTGCTTGGCCATTTCCTCTGATTCCCGTGTCAAGGAAGCTGTTCAAACTGAAAAGGCCCCAGCTGCACTGGGTCCATATTCTCAAGCAATCAAAGCCAACAACCTTTTGTTTGTCTCTGGTGTTCTTGGTCTTGTTCCTGGGACAGGAAAGTTCGTCTCTGAGAATGTTGAAGATCAAACAGAACAGCTCCTAAAAAATATGGGGGAAATCCTCAAAGCTGGCGGGGCAAGCTACTCATCGGTTGTTAAGACAACAATTATGTTGGCTGATTTGAAAGACTTCAAGAAAGTAAACGAGATCTATGCTAAATACTTTTCTTCACCTGCCCCGGCTCGTTCAACATATCAAGTAGCTGCCTTGCCATTAGATGCCAAGATTGAAGTTGAGTGCATAGCAGCACTCTGA 729 0.4952 MLEILLFLAFFLSFCGLRWVTTMNECGHGYRAELSYAEQVGTQAESDKETQKIDGDMAWCVANSFHAPAVHVGVLRNRSQFSAGIGSVSVAGTTSRRSSSSKRSVPFSCLAISSDSRVKEAVQTEKAPAALGPYSQAIKANNLLFVSGVLGLVPGTGKFVSENVEDQTEQLLKNMGEILKAGGASYSSVVKTTIMLADLKDFKKVNEIYAKYFSSPAPARSTYQVAALPLDAKIEVECIAAL 242
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere04g2149 242 CDD YjgF_YER057c_UK114_family 134 240 - -
Dere04g2149 242 Pfam Endoribonuclease L-PSP 125 241 IPR006175 -
Dere04g2149 242 SUPERFAMILY YjgF-like 119 242 IPR035959 -
Dere04g2149 242 Gene3D - 116 242 IPR035959 -
Dere04g2149 242 FunFam Reactive Intermediate Deaminase A, chloroplastic 116 242 - -
Dere04g2149 242 NCBIfam Rid family detoxifying hydrolase 119 241 IPR006056 -
Dere04g2149 242 PANTHER 2-IMINOBUTANOATE/2-IMINOPROPANOATE DEAMINASE RIDA 120 241 IPR006175 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere04g2149 Dere-ChrDere04 24609138 24615668 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere04g2149 04 24609138 24615668 Dere04g2149 04 24609138 24615668 ECH