Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere04g2027 ATGGCTGATCATCATCAGAGAATTTACCCTGTCCATGATGTGGAGGCACCACCACACACACCCTCAGCACCTCTGTTCCCAAGAGACACGTCAAAATCCGATAAGGGCGAGCCGGTGGAGGAGCACGCCGGGCTGGCAGTGCATCATCCCAAGCCACTACCAAAGAAAAGAAGATCAAGAAGCTGCTGCTGCAAGTTCCTGTGCTGGATCATAAGCCTTCTGCTGATACTAATTGTAGCAATAGGCATAACCATAGGAATTCTGTACCTTGTGTTTAGGCCAAAGCTTCCCAAATACTCAATAGACGGACTAAGAGTAACCCAGTTCGATCTTTCAGGAGATAACAATTTATCTGCGACTTTCAATGTGACCCTCACAGCTAGAAACCCCAACAAGAAGATTGGGATATACTATGAGGGAGGCAGCCATGTGAGTGCTTGGTACATGGACACAAAATTATGTGAAGGGTCTTTGCCTAAGTTCTATCAGGGTCACAGAAATACTACAGTGCTTAATTTGCTTCTTTCTGGGCAAACACAGAATGCAACTGGGTTACAAAGTGTATTACTAGAGCAGGTACAGCAGACAGGGAATATTCCCCTGAATCTCAAGGCCAAGCAGCCTGTGAGGGTGAAGCTTGGGAAATTGAAGCTGTTCGAAGTGAAGTTCAGGGTTAGTTGCAGGCTTGTGGTGAATAGTCTGGATACTGCCAATGAGGTTAGGATTAATAGTAGCAGCTGTAAGTTCAGGCTTAGGCTGTGA 762 0.4619 MADHHQRIYPVHDVEAPPHTPSAPLFPRDTSKSDKGEPVEEHAGLAVHHPKPLPKKRRSRSCCCKFLCWIISLLLILIVAIGITIGILYLVFRPKLPKYSIDGLRVTQFDLSGDNNLSATFNVTLTARNPNKKIGIYYEGGSHVSAWYMDTKLCEGSLPKFYQGHRNTTVLNLLLSGQTQNATGLQSVLLEQVQQTGNIPLNLKAKQPVRVKLGKLKLFEVKFRVSCRLVVNSLDTANEVRINSSSCKFRLRL 253
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere04g2027 253 MobiDBLite consensus disorder prediction 30 48 - -
Dere04g2027 253 PANTHER LATE EMBRYOGENESIS ABUNDANT (LEA) HYDROXYPROLINE-RICH GLYCOPROTEIN FAMILY 22 248 - -
Dere04g2027 253 Pfam Late embryogenesis abundant protein 124 228 IPR004864 -
Dere04g2027 253 MobiDBLite consensus disorder prediction 1 56 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere04g2027 Dere-ChrDere04 23265414 23266175 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere04g2027 48 253 EF-hand Containing Proteins AT5G21130 30.097 4.55e-33 119
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere04g2027 04 23265414 23266175 Dere04g2027 04 23265414 23266175 ECH