Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere04g2025 ATGGAGAACCTTAATCTTACCCTAATATCATCCCCGAAACCGGCGTTGTTGGGGCATTGTCCTGCAAGAAATTTCACTAAAGACTTCTTTAGAAGAAAGCCTTTTTCATTTGGAAGTGCAATAAGTGCGCCTCCTTATTCTAGATATATCGTGTCTACTCTCTCTCGGTCTCATGTTACTCGGGGTGCCGCTAAACCCCACCAAAACCCAAAATCTGTGCAGGACAAGCTGATAGTGGAGCATTTTGCTAGCATTTCTTCATCAAGTAATCGAGAAACATCATCAATTGGAGTTAACCCACAATATTCAGTACCACCTCCATCACCAACTATAGGGTCGCCTCTGTTCTGGATCGGTGTTGGTGTTGGGCTATCTGCACTTTTCTCAGTGGTATCTGCAAGAATAAAGAAGTATGCAATGCAACAAGCTTTCAAGACTATGATGGGCCAGATGAATTCACAAAGTAATCAATTTAACAGTGCCTTTTCTCCTGGATCTCCTTATCCATTTCCTATGCCTTCAGTGTCGGGGCCTGCTGCACCTGCTGCTTCTCCAGGTGCTCCTCAATCTCGAGCATCTTCAGCATCTGGCACGTCTCAATCTTCTGTCACAGTAGATATACCTGCAACAAAAGTAGAAGCAGCTCCAGCCACCAATGTCCAGGATGAAACACAATCAAAGAATGAACCCAAAAAAATTGCTTTTGTAGATGTTTCTCCGGAAGAAACTCAGCAGAAAAATCCATTTGAAAGCTTCAAAGATGTTAGTGAACCGCGTTCATCCACGGAAATGCAGGTTCTTGAGGAAGTTTCTCAAAATGGAGCAGCCCCTAACCAGGGTTTTGGTGATTCATCTGGTTCTCAATCTACAGGAAAATCAGTCTTATCAGTGGAAGCTTTGGAGAAAATGATGGAAGACCCAACAGTGCAGAAGATGGTTTATCCCTATTTACCTGAGGAGATGAGGAATCCTACTACCTTCAAATGGATGCTGCAGAATCCTCAATACCGTCAACAACTTGAAGAAATGCTAAACAACATGAGTGGGAGTGGCGAATGGGACAGCCGAATGATGGACACCTTGAAAAATTTTGACCTGAATAGTCCTGAGGTTAAGCAACAATTTGATCAAATTGGGCTTACTCCTGAAGAGGTCATTTCAAAGATAATGGCCAATCCTGATGTTGCAATGGCGTTTCAAAATCCTAGAGTTCAAGCAGCCATCATGGATTGTTCTCAGAACCCACTGAACATTTCTAAATATCAAAATGACAAGGAGGTTATGGACGTCTTCAATAAAATATCACAACTCTTCCCTGGAGCGACAGGCCACACTAGAAATTCCATGGGTACATGTCTGAGTAAGAAGAAAGAGTCTTCTACCTCCTCTGTTTCTGGAACTAAGTCACTTTCTAGTTCTACACGACCTCTTCAACCCCAAACTGTCACTGTCTCCAAACCTAAAGTGGAAACTGAGCCAGACGCGAGCCTAAAGGAGACGAAGCAAGAAGATGGAGGCCAAGTGAAAAAAGAGGTTTTTATCATCAAGCACAGGAAGAGCCATGATGGTAGTAGTAAAGAGAAAAATTCCAAACACCCATCTTCTGATGGGGTTGCTTCAAATATAACTACCAATGTAGTACCAACGGAAGCAAATGGGCTTGTAGTTGTGAGGACTTCAAGCTGCACCAAAGAAGAAGTGGATGCGATTCTCTTACAGTGTGGAAGACTGAGCAGAAGCTCTTCAGGTAAAGCTGTTTCTTCTGGTGAACGTGGGAGAGGTAGGAAGTACTCTGGTTCAAAGAGAAGCCATGATTTTGACCACTGTGAGAATGATACTGCAAATGTCACTGGCAATAGTGATTTATTATGTGAGGATGATGATGGGGTGGCTGGAGAGAACCGCCACCATCTCCGGCAGCACCGACACCAACGGAGATCTCCCGGGCCTTCTTCGGAGAGAAGAAGAACCCCCAGCAGAGAAAGAGACCAGCAGCAGCGCTCGAGCAGCAGAGAGAGGAGAGTCAGTAGATCTCCAAGCAGAAGATCATCAGATACTACTCCTAGCAACGCCACAAATAGCAACACTAACAATAACAATAATAGCAATACCGCTACAACTAGGCCTGGAAAAATGGTCTCTGTCCCTCCTACTGTTTCATCCTTGGCTATGGATAAGAGTAACAATGGTGGGGGAGGCATCAAGAGGATCTCAGTGAAGAGAAATGTTGGTGCAGCCTCATCTCGTTCTCAATCTCCTGCAAGAGCAAATGGAAATGGAGCAAATAATAAAGTTCCATTGTTCAGTGAGAATCAGCAACAGCAACCTTCACTAAGTCGCAATTCTTCAAGGAAAGCAGAACAATCTCCTTACAGAAGAAACCCACTAAATGAGATTGAATTTGATTCTCTTGCCTATCCACAATCAGCCAACAATAATAGCAACAAGCTTCAAAGCAGACCCAAGAAGGATATTGAACCAGAAGCTTATCAGAAAACAAATGTTGATACGAAAGACGGCACCAAAAGCAGAACAAGCAGCAAGATGACAAAGGAGCAACAGGAGGAAGAGCAGGTCAAAGGGCAATCTTTGATGACAGAAAATGTTGTTCTGAAGACAACAGTGATGCCTTTAGGGCTCGACAACCTTAAACCTCAGACTCTAACATTAACAAGAAGCAGATCTTCAAGGAGATCTCGAGACCTAGACCACCTCCTCAATCCTGAAACCTTGACGAATCCTGCACAGTCTTACACTTCTCTACTACTTGAAGACATCCAAAACTTCCATCAAAAGAACAACAACAACAATAATACACCTTCCATTCCTCTTCCAGCTTGTGTCGCAAAAGCTTGCTCTATCCTCGAAGCTGTCGCTGATCTAAATTCCAATACAAGCTTCAATTTCTCTGCCAATCATTATGCGAAGAGGGTCCCAGATTCTAGTACCAGGGAATACCCTTTTGTGGAATCCGAGGTGATTGTCATTGATGATGTAATGGAGCCTAGCTTACAAAAGTATGTCACAGTAAGTAGAGGTGGTGGCGTCGCTGATATGGAGGACCAAGAATCTTCTGGTAGCAACAGCTTCACTGTGAGTGGACAAAAGCACTTGGGGTTTTCTTCTTCTTCCTATTCATGGGAACCCAATTCTAGTGATTCAACAGATTGTCGGACTTCTTCAACATTAAACTCAAGCAAAAGAAGAGAATGTAATTTTCAGGGGATAGGAGGTGGGAGGTTTGGTGGCAATAATGAAGGTGTTCAAGCGATACCAGTTGTTGTCACAGCGGCTACATCCACGTAG 3306 0.4368 MENLNLTLISSPKPALLGHCPARNFTKDFFRRKPFSFGSAISAPPYSRYIVSTLSRSHVTRGAAKPHQNPKSVQDKLIVEHFASISSSSNRETSSIGVNPQYSVPPPSPTIGSPLFWIGVGVGLSALFSVVSARIKKYAMQQAFKTMMGQMNSQSNQFNSAFSPGSPYPFPMPSVSGPAAPAASPGAPQSRASSASGTSQSSVTVDIPATKVEAAPATNVQDETQSKNEPKKIAFVDVSPEETQQKNPFESFKDVSEPRSSTEMQVLEEVSQNGAAPNQGFGDSSGSQSTGKSVLSVEALEKMMEDPTVQKMVYPYLPEEMRNPTTFKWMLQNPQYRQQLEEMLNNMSGSGEWDSRMMDTLKNFDLNSPEVKQQFDQIGLTPEEVISKIMANPDVAMAFQNPRVQAAIMDCSQNPLNISKYQNDKEVMDVFNKISQLFPGATGHTRNSMGTCLSKKKESSTSSVSGTKSLSSSTRPLQPQTVTVSKPKVETEPDASLKETKQEDGGQVKKEVFIIKHRKSHDGSSKEKNSKHPSSDGVASNITTNVVPTEANGLVVVRTSSCTKEEVDAILLQCGRLSRSSSGKAVSSGERGRGRKYSGSKRSHDFDHCENDTANVTGNSDLLCEDDDGVAGENRHHLRQHRHQRRSPGPSSERRRTPSRERDQQQRSSSRERRVSRSPSRRSSDTTPSNATNSNTNNNNNSNTATTRPGKMVSVPPTVSSLAMDKSNNGGGGIKRISVKRNVGAASSRSQSPARANGNGANNKVPLFSENQQQQPSLSRNSSRKAEQSPYRRNPLNEIEFDSLAYPQSANNNSNKLQSRPKKDIEPEAYQKTNVDTKDGTKSRTSSKMTKEQQEEEQVKGQSLMTENVVLKTTVMPLGLDNLKPQTLTLTRSRSSRRSRDLDHLLNPETLTNPAQSYTSLLLEDIQNFHQKNNNNNNTPSIPLPACVAKACSILEAVADLNSNTSFNFSANHYAKRVPDSSTREYPFVESEVIVIDDVMEPSLQKYVTVSRGGGVADMEDQESSGSNSFTVSGQKHLGFSSSSYSWEPNSSDSTDCRTSSTLNSSKRRECNFQGIGGGRFGGNNEGVQAIPVVVTAATST 1101
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere04g2025 1101 SMART CBM 306 340 IPR006636 -
Dere04g2025 1101 SMART CBM 382 421 IPR006636 -
Dere04g2025 1101 MobiDBLite consensus disorder prediction 187 204 - -
Dere04g2025 1101 MobiDBLite consensus disorder prediction 681 727 - -
Dere04g2025 1101 MobiDBLite consensus disorder prediction 172 204 - -
Dere04g2025 1101 MobiDBLite consensus disorder prediction 589 611 - -
Dere04g2025 1101 MobiDBLite consensus disorder prediction 743 790 - -
Dere04g2025 1101 MobiDBLite consensus disorder prediction 819 858 - -
Dere04g2025 1101 MobiDBLite consensus disorder prediction 438 544 - -
Dere04g2025 1101 MobiDBLite consensus disorder prediction 236 264 - -
Dere04g2025 1101 MobiDBLite consensus disorder prediction 1043 1068 - -
Dere04g2025 1101 MobiDBLite consensus disorder prediction 438 487 - -
Dere04g2025 1101 FunFam Protein TIC 40, chloroplastic 382 443 - -
Dere04g2025 1101 Gene3D - 382 443 - -
Dere04g2025 1101 Pfam STI1 domain 383 434 IPR041243 -
Dere04g2025 1101 MobiDBLite consensus disorder prediction 646 680 - -
Dere04g2025 1101 PANTHER OS02G0734667 PROTEIN 449 1068 IPR040412 -
Dere04g2025 1101 MobiDBLite consensus disorder prediction 578 861 - -
Dere04g2025 1101 MobiDBLite consensus disorder prediction 491 533 - -
Dere04g2025 1101 MobiDBLite consensus disorder prediction 804 818 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere04g2025 Dere-ChrDere04 23243031 23259269 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere04g2025 04 23243031 23259269 Dere05g1164 05 18676622 18678988 CCT
Dere04g2025 04 23243031 23259269 Dere04g2025 04 23243031 23259269 ECH