Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere04g1764 ATGACTGCCGATGAGCAAATTATTACGTTGGATGTCGATCCCCATGAATCTGTGGAAAACGTCAAAGCATTGCTTGAGGTGGAGACACAAGTGCCTCTTCAGCAACAGCAACTTCTCTATAATGGAAGGGAGATGAGGAATTCTGAGAAACTTAGTGCGCTTGGTGTTACAGATGAAGATTTGGTGATGATGGTCTCTGCTGCTCCTTCTGGTGCATCTGCCAATGATTTGGGCTTCAATGCTGATGGATCTGCTGTTAATCCTGCTGCTTTCCAGCAGCACATTAGAGGTGATTCTAACCTGATGGGTCAACTCTTTCAGACTGATCCAGAGTTGGCACAAGCTATTATTGGAAATGATCTTAACAGAATACAGGAGATTTTACGATTACGTCATCAACATAGAGCTGAATTACAGCGTCAAAAAGATGAGGAACTTGCTCTTCTTTATGCAGATCCTTTTGATGTTGAAGCACAAAAGAAGATTGAAGCTGCCATTCACCAGAAAGGAATTGATGAAAACTGGGCAGCCGCACTAGAGCATAATCCTGAAGCTTTTGCAAGAGTGGTCATGTTGTATGTTGACATGGAGGTTAATGGTGTCCCACTGAAGGCATTTGTTGATAGTGGAGCCCAGTCTACCATTATATCAAAAAACTGTGCTGAGCGTTGTGGATTGTTGAGACTTTTAGATCAGCGTTACAAGGGAATTGCTCACGGAGTGGGCCAATCAGAGATATTGGGTCGGATTCATGTAGCTCCAATCAAGATTGGGAATATATTCTACCCTTGCTCATTCTTAGTGCTGGATTCTCCTAATATGGAATTCCTTTTCGGGCTGGATATGCTCCGAAAGCACCAGTGCATTATAGATTTAAAAGAAAATGTATTGCGAGTTGGTGGAGGAGAAGTTTCTGTGCCATTTTTGCAAGAAAAAGACATACCATCTCGGTTTCTAGATGAAGAGCGGTATGCTAAGGAAGCATCCAGCTCAGGTGCCCCAGGGGCAGGAACAACAGATAGGGGCAATAGTGCTCCAAGAGAAGGCCAGTCTTTGGGAGGAGCTTCTGGTGGCATGTCTCAGGAGAGTGATTTTGAAGCCAAAGTCGCAAAGCTGGTTGAGTTAGGATTTGGAAGAGAAGCAGTAGTACAAGCTCTTAAACTATTCAATGGCAATGAGGAACAGGCTGCTGGGTTTCTTTTTGGGGGTTTCTAG 1215 0.4395 MTADEQIITLDVDPHESVENVKALLEVETQVPLQQQQLLYNGREMRNSEKLSALGVTDEDLVMMVSAAPSGASANDLGFNADGSAVNPAAFQQHIRGDSNLMGQLFQTDPELAQAIIGNDLNRIQEILRLRHQHRAELQRQKDEELALLYADPFDVEAQKKIEAAIHQKGIDENWAAALEHNPEAFARVVMLYVDMEVNGVPLKAFVDSGAQSTIISKNCAERCGLLRLLDQRYKGIAHGVGQSEILGRIHVAPIKIGNIFYPCSFLVLDSPNMEFLFGLDMLRKHQCIIDLKENVLRVGGGEVSVPFLQEKDIPSRFLDEERYAKEASSSGAPGAGTTDRGNSAPREGQSLGGASGGMSQESDFEAKVAKLVELGFGREAVVQALKLFNGNEEQAAGFLFGGF 404
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere04g1764 404 Gene3D - 366 401 - -
Dere04g1764 404 ProSiteProfiles Ubiquitin-associated domain (UBA) profile. 362 403 IPR015940 -
Dere04g1764 404 CDD RP_DDI 176 299 IPR019103 GO:0004190|GO:0006508
Dere04g1764 404 Coils Coil 124 144 - -
Dere04g1764 404 SUPERFAMILY Acid proteases 177 292 IPR021109 -
Dere04g1764 404 MobiDBLite consensus disorder prediction 332 358 - -
Dere04g1764 404 SMART ubq_7 2 67 IPR000626 GO:0005515
Dere04g1764 404 SUPERFAMILY UBA-like 352 403 IPR009060 GO:0005515
Dere04g1764 404 FunFam DNA damage inducible 1 homolog 2 169 316 - -
Dere04g1764 404 Pfam UBA/TS-N domain 366 399 IPR015940 -
Dere04g1764 404 CDD UBA_scDdi1_like 366 401 - -
Dere04g1764 404 MobiDBLite consensus disorder prediction 326 360 - -
Dere04g1764 404 CDD Ubl_Ddi1_like 4 65 IPR033882 -
Dere04g1764 404 Gene3D - 1 76 - -
Dere04g1764 404 SMART uba_6 365 402 IPR015940 -
Dere04g1764 404 Gene3D Acid Proteases 170 316 IPR021109 -
Dere04g1764 404 ProSiteProfiles Ubiquitin domain profile. 1 71 IPR000626 GO:0005515
Dere04g1764 404 SUPERFAMILY Ubiquitin-like 2 75 IPR029071 -
Dere04g1764 404 Pfam Aspartyl protease 169 291 IPR019103 GO:0004190|GO:0006508
Dere04g1764 404 Pfam Ubiquitin family 4 65 IPR000626 GO:0005515
Dere04g1764 404 PANTHER ASPARTYL PROTEASE DDI-RELATED 1 400 - -
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere04g1764 04 20162088 20169433 Dere04g1764 04 20162088 20169433 ECH