Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere04g1716 ATGGGAGAGAAAAGGGAAGGAGAAGAGAAGGAAGCTGATGAAGCTCCATTGTTGTTTGAGACAAAGGAAGGAAGATGGAGGGCAGCTTACAGAGTATTTGCATGCACAATATTTGCAGGTATATGGCTGATATGGGTTTACAGAGTGAGAAAGATGCCAGAAAGAGGAGAGGAAGGAAGATGGCGTTGGATTAGTTTGCTGATGTGTGAGATTGGGTTTGGACTATACTGGATTCTCTCTCAGTCTGTTCGTTGGAGAATTCTCTATCACTCACCCCTCAAGCGCACACTCATCCACAGCATCGACCTTCACACACAAAACCAGAGACAAGAGAAAGCAAGGATGGGTGGCGCCAGCGGTGAGATGCATCAACCTTTGTTTGAGACAAGGAGAGACCAAAGAAGGCTCATCGTCTATAGGCTCTTCTCTCTCTCGCTGTTGGCCGGAATATTCTCAATCTGGCTTTATAGAGTCTCTCAGTTATTCATCCATGGTGGTGGAGAAGAAGAAGAAGAAGAAGATGAAGAAGAAGAGAGATGTTGGGTCTTCTGGCTTGGTTTGTTTGGTGCAGAGCTATGGTTCGGCCTCTACTGGGTCCTCACTCAAGCACTCCGATGGAACCCTGTCTTCAGACAACCTTTCAACCACAGACTCTCTCAAAGATACGAGAGTAAACTGCCGAGAGTGGACATATTTGTGTGCACAGCAGACCCAGAGATAGAGCCACCAGTGATGGTGATTAACACAGTGTTATCGGTTATGGCATTTCACTATCCCTCCGAGAAGCTCACTGTGTATCTCTCAGACGACGCTGCCTCTGATATCACCTTCTTCGCTTTATTAGAAGCCTCTTCTTTTGCGAAGCACTGGCTTCCTTTCTGCAAGAGATTCAAGGTGGAGCCCAGGTCTCCTTCTGCTTATTTTAAGACTATTTCCCCATCCGACTCTATAATTTGGACTCAAGAGTTCGCAGCCATAAAGGAATTATACGAAGATATGGAAAGACGAATAGGAGAAGCAGCCATGTCGGGTGAAGTACCCAAAGATGTACGTTCAAAGCACAAGGGGTTTTCTCAGTGGGACTCGTTTTCTTCTCGACGTGATCACGATACAATTCTTCAAATATTACTTCATAGAAAAGATCCATGCAATTCGACAGATGCAGATGGGTGTGTTTTGCCAACTCTGGTGTACATGGCTCGCGAGAAGAGACCCCAATATCCCCATCATTTCAAAGCTGGAGCCATGAATTCATTGCTAAGGGTGTCTTCAAAGATAAGCAACGGCAAGATCATTCTGAATGTGGACTGTGATATGTACTCTAACAATTCAGAATCAGTGAGAGATGCGCTCTGCTTCCTCATGGACGAAGAGAAAGGTCATGAAATTGCTTTTGTGCAGTTCCCCCAGAAATTTGTTGGTGTTACTAGGAATGACTTGTACGGGAGTACTCTACGAGTAATTTTCGAGGTGGAATTCCCAGGTTTCGATGGTTATGGTGGTCCATTGTATGCCGGGACAGGATGCTTTCACAGGAGAAATATTCTCTGTGGGAGGAAGTTTAGTGATAAACAAAATATTAATGACTGGAAGATCGACGACGACCTATCAATGGAAGTAAGCTTGCATGAACAAGAAGAAGAATCAAAGGCACTTGCAAGTTGCACCTATGAAGAAAACACTCTCTGGGGAACAGAGATGGGGTTACTGTATGGGTGTGCAGTGGAGGATGTGATAACAGGTTTGTCTATACAGAGCAAAGGATGGAAATCAGTGTATTACAATCCACCAAGGAAGGCATTCTTAGGTGTCGCTCCAAACACCTTGGCCCAAACACTAGTTCAACACAAGAGATGGTCTGAGGGTGACCTTCAGATTTTGTTTTCCAAGTACAGTCCTGCTTGGTATGGTTATGGAAAAATAAGCTTAGGCCTCCAAATGGGATACTGCACCTCTTGCTTATGGGCACCTAGCTGTTTAGCAACACTCTATTACACCATCATCCCTTCACTTTATCTCCTTAAGGGCACTTCCATTTTCCCCAAGATGTCAAATCCATGGTTCATACCTTTTGCATATGTAATACTTGGGGAAACTACTTATAGCTTGTTGGAGTTTTTGAGCTCTGAAGGCACAATCCAGGGCTGGTGGAATGAACAGAGAATGTGGCTGTACAAGAGAACAAGCTCTTACTTTTTTGCTTTCATCGACACCACCTTGAATCTTCTAGGGTTTCCTTCTGATTCAACCTTCACAATCACACCTAAAGTGGCAGACCAAGACGTTTCCCAACGGTATGAGACAGAAGTTATGGAGTTCGGAACCTCTTCTCCTATGTTCACTGTATTATCAACACTGGCTATGCTCAATTTGTTTTGCTTTCTTGGCATGTTAAAGGATGCACTTATAAGTGAAGGTGGCTTTGTTAGGGTTTGTGAGAGAATGGTGTTGCAGGTTTTGTTATGTGGGGTTCTGGTTCTGATCAATTTGCCTATATACCAAGGCCTTTTCTTTAGGAAGGACAAGGGAAGATTGCCGAGTTCTGTTGCCATTAAATCTACAGTATATGCTTTAAGTGCATGTGTCCTCTTCAAAGCCTTGGAGTGA 2607 0.4419 MGEKREGEEKEADEAPLLFETKEGRWRAAYRVFACTIFAGIWLIWVYRVRKMPERGEEGRWRWISLLMCEIGFGLYWILSQSVRWRILYHSPLKRTLIHSIDLHTQNQRQEKARMGGASGEMHQPLFETRRDQRRLIVYRLFSLSLLAGIFSIWLYRVSQLFIHGGGEEEEEEDEEEERCWVFWLGLFGAELWFGLYWVLTQALRWNPVFRQPFNHRLSQRYESKLPRVDIFVCTADPEIEPPVMVINTVLSVMAFHYPSEKLTVYLSDDAASDITFFALLEASSFAKHWLPFCKRFKVEPRSPSAYFKTISPSDSIIWTQEFAAIKELYEDMERRIGEAAMSGEVPKDVRSKHKGFSQWDSFSSRRDHDTILQILLHRKDPCNSTDADGCVLPTLVYMAREKRPQYPHHFKAGAMNSLLRVSSKISNGKIILNVDCDMYSNNSESVRDALCFLMDEEKGHEIAFVQFPQKFVGVTRNDLYGSTLRVIFEVEFPGFDGYGGPLYAGTGCFHRRNILCGRKFSDKQNINDWKIDDDLSMEVSLHEQEEESKALASCTYEENTLWGTEMGLLYGCAVEDVITGLSIQSKGWKSVYYNPPRKAFLGVAPNTLAQTLVQHKRWSEGDLQILFSKYSPAWYGYGKISLGLQMGYCTSCLWAPSCLATLYYTIIPSLYLLKGTSIFPKMSNPWFIPFAYVILGETTYSLLEFLSSEGTIQGWWNEQRMWLYKRTSSYFFAFIDTTLNLLGFPSDSTFTITPKVADQDVSQRYETEVMEFGTSSPMFTVLSTLAMLNLFCFLGMLKDALISEGGFVRVCERMVLQVLLCGVLVLINLPIYQGLFFRKDKGRLPSSVAIKSTVYALSACVLFKALE 868
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere04g1716 868 FunFam Cellulose synthase isolog 219 316 - -
Dere04g1716 868 PANTHER X-BOX TRANSCRIPTION FACTOR-RELATED 124 855 - -
Dere04g1716 868 Pfam Cellulose synthase 547 864 IPR005150 GO:0016020|GO:0016760|GO:0030244
Dere04g1716 868 Pfam Cellulose synthase 229 532 IPR005150 GO:0016020|GO:0016760|GO:0030244
Dere04g1716 868 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 379 557 IPR029044 -
Dere04g1716 868 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 219 309 IPR029044 -
Dere04g1716 868 SUPERFAMILY Nucleotide-diphospho-sugar transferases 244 669 IPR029044 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere04g1716 Dere-ChrDere04 19607664 19614258 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere04g1716 11 97 Glycosyltransferase AT1G55850 40.449 3.25e-10 62.0
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere04g1716 04 19607664 19614258 Dere04g1716 04 19607664 19614258 ECH