Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere04g1708 ATGTCGGAAAAGGGTCGGCCACTACCAAAATTTGGTGAATGGGATGTCAATGATCCTGCCTCAGCTGAAGGGTTCACTGTGATCTTTAACAAGGCTAGGGATGAGAAAAAGACAGGTGGCAAACCTGAGTCACCTGGAAAGGCTGATCCTCAAAGCAGGCCTGCAATAGATCCTGGAAAAGCTCAAAGTAAAAAATGGTTCTGCTGCATGCAACCTCCTGCGGAGTCATAG 231 0.4762 MSEKGRPLPKFGEWDVNDPASAEGFTVIFNKARDEKKTGGKPESPGKADPQSRPAIDPGKAQSKKWFCCMQPPAES 76
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere04g1708 76 PANTHER RPM1-INTERACTING PROTEIN 4 (RIN4) FAMILY PROTEIN 3 68 IPR040387 -
Dere04g1708 76 MobiDBLite consensus disorder prediction 31 64 - -
Dere04g1708 76 Pfam Cleavage site for pathogenic type III effector avirulence factor Avr 3 38 IPR008700 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere04g1708 Dere-ChrDere04 19499678 19502838 Dispersed/Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere04g1708 04 19499678 19502838 Dere04g1708 04 19499678 19502838 ECH